CK936955

Overview
NameCK936955
Unique NameCK936955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBC3 (Chaperone protein dnaJ OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 41/77 (53.25%), Postives = 59/77 (76.62%), Query Frame = 2
Query:  113 DYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYG----EEGLKG 331
            D+Y++LGV R+A + D+KKAY++LAM++HPD+N  +   AE KFK++ EAYE+L+D QK+A YDQYG    E+G  G
Sbjct:    5 DFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAE-KFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGG 80          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_SYMTH (Chaperone protein dnaJ OS=Symbiobacterium thermophilum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 2
Query:  113 DYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYG 313
            DYY+ILGV RNA + ++KKA+R LA ++HPD N ++  DA  KFK+I+EAY+VLSDP+KRA YDQ+G
Sbjct:    8 DYYEILGVPRNATEAEIKKAFRNLARKYHPDANKDD-PDAAEKFKEINEAYQVLSDPEKRARYDQFG 73          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_RICAH (Chaperone protein dnaJ OS=Rickettsia akari (strain Hartford) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  104 MGVDYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYGEEGLKGQ 334
            M  DYYKILGV + A   DLKKAY KLA ++HPD    + KDAE KFK+I+ AY+VL D QKRA YD++G +  + Q
Sbjct:    1 MSQDYYKILGVSKTASQADLKKAYLKLAKQYHPD--TTDDKDAEKKFKEINRAYDVLKDEQKRAAYDRFGHDTFQNQ 75          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOPB (Chaperone protein dnaJ OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 2
Query:  116 YYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYG 313
            YY+ L VDR+A D  LK A+RKLAM+WHPD+NP +   +E++FK+I+EAYEVL D  KRA YD+YG
Sbjct:    8 YYETLEVDRSADDSSLKAAFRKLAMKWHPDRNPGD-ASSESRFKEINEAYEVLKDGDKRAAYDRYG 72          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_METS4 (Chaperone protein dnaJ OS=Methylobacterium sp. (strain 4-46) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 39/67 (58.21%), Postives = 55/67 (82.09%), Query Frame = 2
Query:  113 DYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYG 313
            DYY++LGV + A + +LK A+RKLAM +HPD+NP + K+AE KFK+++EAY+ LSD QKRA YD++G
Sbjct:    5 DYYEVLGVAKTAGEAELKSAFRKLAMAYHPDRNPGD-KEAEIKFKEVNEAYQTLSDDQKRAAYDRFG 70          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 2
Query:  113 DYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYGEEGLKGQ 334
            DYY+ILG+ ++A  +D+KK YRKLA+++HPD+N +    AE KFK+ISEAY VLSD +KRA YD++G  G+  Q
Sbjct:    6 DYYEILGLPKDASVEDIKKTYRKLALQYHPDRNKD--PGAEDKFKEISEAYAVLSDTEKRAQYDRFGHAGIDNQ 77          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 2
Query:  113 DYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYG 313
            DYY++LG+ ++A  D++KKAYRKL+ ++HPD N   +  A+ KFK+ISEAYEVLSD QKRA YDQYG
Sbjct:    5 DYYEVLGISKSASADEIKKAYRKLSKQYHPDIN--KEAGADEKFKEISEAYEVLSDSQKRAQYDQYG 69          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_HELPY (Chaperone protein dnaJ OS=Helicobacter pylori GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 40/74 (54.05%), Postives = 61/74 (82.43%), Query Frame = 2
Query:  104 MGVDYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYGEEGL 325
            M + YY+IL V++++  + +KK+YRKLA+++HPD+N  +K +AE KFK I+EAY VLSD +KRA+YD+YG++GL
Sbjct:    1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGL 73          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEPS (Chaperone protein dnaJ OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 38/72 (52.78%), Postives = 56/72 (77.78%), Query Frame = 2
Query:  113 DYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYGEEGLK 328
            DYY++LG+ + A + ++K+AY++LA + HPDKN  +K +AE KFK+I EAYEVL D +KRA+YDQYG +  +
Sbjct:    5 DYYEVLGLQKGASEQEIKRAYKRLAAKHHPDKNQGSK-EAEEKFKEIKEAYEVLGDNEKRAMYDQYGHQAFE 75          
BLAST of CK936955 vs. ExPASy Swiss-Prot
Match: DNAJ_EUBE2 (Chaperone protein dnaJ OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 2
Query:  113 DYYKILGVDRNAKDDDLKKAYRKLAMRWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAVYDQYGEEGLKG 331
            DYY++LGV ++A D  +KKAYR+LA ++HPD NP + K+AE KFK+ SEAY VLSD +KR  YDQ+G    +G
Sbjct:    6 DYYEVLGVPKDADDAAIKKAYRQLAKKYHPDMNPGD-KEAEIKFKEASEAYAVLSDAEKRRQYDQFGHAAFEG 77          
The following BLAST results are available for this feature:
BLAST of CK936955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_VIBC36.697e-1753.25Chaperone protein dnaJ OS=Vibrio cholerae serotype... [more]
DNAJ_SYMTH6.697e-1761.19Chaperone protein dnaJ OS=Symbiobacterium thermoph... [more]
DNAJ_RICAH6.697e-1755.84Chaperone protein dnaJ OS=Rickettsia akari (strain... [more]
DNAJ_RHOPB6.697e-1760.61Chaperone protein dnaJ OS=Rhodopseudomonas palustr... [more]
DNAJ_METS46.697e-1758.21Chaperone protein dnaJ OS=Methylobacterium sp. (st... [more]
DNAJ_METAC6.697e-1755.41Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]
DNAJ_LISW66.697e-1761.19Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_HELPY6.697e-1754.05Chaperone protein dnaJ OS=Helicobacter pylori GN=d... [more]
DNAJ_HAEPS6.697e-1752.78Chaperone protein dnaJ OS=Haemophilus parasuis ser... [more]
DNAJ_EUBE26.697e-1756.16Chaperone protein dnaJ OS=Eubacterium eligens (str... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004515_H10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936955 ID=CK936955; Name=CK936955; organism=Citrus sinensis; type=EST; length=879bp
GGGGACCCACACACAATTGACAGAAAGTCTGAAGCATTTTTGTAAGCAGA
ATAAGAAGAAGAGATAGTGAAAGTAAAGAAGAGAAAGATAGGAGAAGAAG
AAGATGGGAGTTGATTATTATAAGATACTGGGTGTTGATAGGAATGCTAA
AGATGATGACTTGAAGAAGGCTTATCGGAAGCTGGCCATGAGGTGGCATC
CTGATAAGAACCCCAATAACAAGAAAGATGCCGAAACTAAGTTCAAGCAA
ATCTCTGAAGCCTATGAGGTGCTGAGTGATCCTCAGAAAAGAGCGGTATA
TGATCAGTATGGAGAAGAGGGCTTAAAGGGTCAGATGCCACCACCAGATG
CTGGTGGTCCAGGTGGAGCGTCCTTCTTCTCCACTGGAGAAGGGCCTACG
TCATTTCGGTTCAAACCCCGGAGTGCTGATGACATTTTTGCTGAGTTCTT
CGGTTTTCCACACCCATTTGGTGGCATGGGTGGTGGCGGTGGAGGGATGA
GAGGTTCAAGGTTTGCAGGCGGGTTATTTGGGGATGATATGTTTGGGCCA
TTCGGTGAAGGAGGAGGAGGATCAATGGGTGGTGGTGGGGCTAGAAAAGC
GCCTCCGATAGAGAATAAGTTGCCTTGTAGCCTTGAGGATCTCTATAAGG
GGACCACTAAGAAGATGAAGATCTCTAGAGAGATAGCTGATATAAGTGGC
AAGACTATGCAGGTAGAGGAAATTCTAACTATTGATGTGAAGCCCGGATG
GAAGAAGGGTACAAAGATCACCTTCCCTGAGAAAGGAAATGAGCAGCCAA
ATGTTATACCTGCTGATCTTGTATTCGTTATTGATGAGAAGCCTCACAGT
GTATTTACTCGGGATGGAAATGATTGGAT
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