CK936895

Overview
NameCK936895
Unique NameCK936895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936895 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.091e-26
Identity = 75/192 (39.06%), Postives = 104/192 (54.17%), Query Frame = 1
Query:  139 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSWLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 714
            QD CVA N P      +G  C+      A DF+   L +PG            A V+Q P +N LGISA R+D  P G  P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +FVFPQGL+HFQ+N G T A A++A +S  PG + I D    AN ++   ++ K   L    V+ L++KF
Sbjct:   29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG-LQILDYALFAN-NLPTSYVVKGTFLAEAEVRRLKSKF 215          
BLAST of CK936895 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.070e-26
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:  124 DPGHLQDVCVAINDPKD--GVF-VNGKFCKDPKLARAEDFFFSWLGKPGNTANRL-GVDET-DANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 705
            DP  L D CVA        G F +NG  C DP LARA+ F  S L +  N A  L G + T  +    +PG N  G++  RID AP G  PPH HPRASE  LVL G++ VGF  +   +  L  ++L  G+ FVFP+ ++HF +N+     A   S LNSQ PG   +  + F   P +  + L KAF++  + V+ +Q
Sbjct:   23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDVQRIQ 219          
BLAST of CK936895 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24
Identity = 68/162 (41.98%), Postives = 93/162 (57.41%), Query Frame = 1
Query:  223 AEDFFFSWLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQN 708
            A DF +  L   GNT+N +    T A V Q PG+N LGISA R+D A  G  P H HP ASE+  V +GT+  GF+TS   +NT+  + L  GD+ VFPQGL+H+Q+N G++ A A  A +   PG + I D    AN ++    + K   LD   VK L++
Sbjct:   50 AGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPG-LQITDYALFAN-NLPSAIVEKVTFLDDAQVKKLKS 207          
BLAST of CK936895 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22
Identity = 67/155 (43.23%), Postives = 83/155 (53.55%), Query Frame = 1
Query:  136 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSWLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPG 600
            + D CVA N P      +G  CK+     A DF +S L KPGNT N +    T A V Q PG+  LG++  R+D AP G  P H HP ASEI  V+EGT+   F++S    N +  K L  GDV VFPQGL+ FQ   GK  A     L  + PG
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGDVMVFPQGLLDFQEITGKI-APGLCELRQRNPG 173          
BLAST of CK936895 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.243e-21
Identity = 64/161 (39.75%), Postives = 90/161 (55.90%), Query Frame = 1
Query:  229 DFF-FSWLGKPGNTANRLGVDE---TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLD-PKIVK 696
            DFF F+   K  NT++    +    T A + + P LN   +S   + + P    PPH HPR++E+ LV++G L VGF+ +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S  PG V +  TVFG    I+   L K+F+ D P I+K
Sbjct:   48 DFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFKTDVPTILK 203          
BLAST of CK936895 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.944e-21
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 1
Query:  292 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 705
            T A + + P LN   +S   + Y P    PPH HPR++E+ L+++G L VGFV +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S   G V++  TVFG N  I+   L K+F+ D   ++ L+
Sbjct:   73 TKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFKTDVPTIQKLK 205          
BLAST of CK936895 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.436e-18
Identity = 54/150 (36.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  259 GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 705
            GN+ +   +  T A   + P L    +S   + +      PPHIHPRASE+ +V++G L VG V + + N T+  + L  GD+FVFP+G++HFQFN G    A A+SA  S  PG +++   +FG+   I+   L K+   D   V  L+
Sbjct:   58 GNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGS--GIDDTILDKSMHTDQATVDQLK 204          
The following BLAST results are available for this feature:
BLAST of CK936895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL813_ORYSJ1.091e-2639.06Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GL31_ORYSJ7.070e-2639.00Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL814_ORYSJ2.970e-2441.98Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GLP1_IPONI1.248e-2243.23Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL92_ORYSJ5.243e-2139.75Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL93_ORYSJ8.944e-2140.58Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL91_ORYSJ2.436e-1836.00Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004516_G12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936895 ID=CK936895; Name=CK936895; organism=Citrus sinensis; type=EST; length=818bp
GGGNGAAACACTTGATCAAAGTTTGAGATAGGCACANNNNNTGACTTAAT
CACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGG
CTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGT
GTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTG
CAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCATGGCTAG
GCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAGATGCA
AATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCCG
TATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCCCGTG
CCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTG
ACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGG
AGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTG
GAAAAACAAATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGT
GAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCC
CGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATC
TTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTT
AATATAAATGGCCTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTA
TCATATCTTAATTAATGT
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