CK936893

Overview
NameCK936893
Unique NameCK936893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: ARL15_PONAB (ADP-ribosylation factor-like protein 15 OS=Pongo abelii GN=ARL15 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  140 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 544
            A+ E  ++ +GL  +GKT++L KL        + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  AR+ELH  L   +L     L+ AN QD P A +  EI     L  L
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPL 164          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: ARL15_HUMAN (ADP-ribosylation factor-like protein 15 OS=Homo sapiens GN=ARL15 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  140 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 544
            A+ E  ++ +GL  +GKT++L KL        + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  AR+ELH  L   +L     L+ AN QD P A +  EI     L  L
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPL 164          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: ARL15_BOVIN (ADP-ribosylation factor-like protein 15 OS=Bos taurus GN=ARL15 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  140 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 544
            A+ E  ++ +GL  +GKT++L KL      + + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  AR+ELH  L   +L     L+ AN QD P A +  E+     L  L
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDSVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEVKKYFELEPL 164          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 2
Query:  143 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 535
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL  +L+++ L     L+  NK D+P A +  E+   LGL
Sbjct:   18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGL 148          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 40/132 (30.30%), Postives = 82/132 (62.12%), Query Frame = 2
Query:  143 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 538
            KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R++E++ EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+
Sbjct:   23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 40/132 (30.30%), Postives = 82/132 (62.12%), Query Frame = 2
Query:  143 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 538
            KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R++E++ EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+
Sbjct:   23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLY 154          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 2
Query:  146 KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 544
            ++  +L++GLD AGK+T L  L     +   IPT GFN   +  K+    + ++GG   +R  W+ +      L+FVVDS DR R+  AR ELH++L++D   D  ++V ANKQDL  AM+  E+  +LGL ++
Sbjct:   76 EQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDP--DLPVVVVANKQDLSEAMSMGELQRELGLQAI 207          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: ARL15_MOUSE (ADP-ribosylation factor-like protein 15 OS=Mus musculus GN=Arl15 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.290e-18
Identity = 49/136 (36.03%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  140 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 544
            A+ E  ++ +GL  +GKT++L +L        + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  AR+ELH  L   +L     L+ AN QD P A +  EI     L  L
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSELCSESPENVVSTTGFSIKAVPFQNAVLNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPL 164          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.521e-18
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 2
Query:  143 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 535
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL  +L++D L     L+  NK D P A +  E+   LGL
Sbjct:   18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGL 148          
BLAST of CK936893 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17
Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 2
Query:  143 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 544
            KK+  I+ VGLD AGK+T+L  LK     T  PT     + +   +I F  +D+GG +  R LW  Y  N+ G++F+VDS D  R  E+R  L  +L+  +L    +L+ +NK D+  A++   +    G+  L
Sbjct:   18 KKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHL 151          
The following BLAST results are available for this feature:
BLAST of CK936893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL15_PONAB3.272e-1836.76ADP-ribosylation factor-like protein 15 OS=Pongo a... [more]
ARL15_HUMAN3.272e-1836.76ADP-ribosylation factor-like protein 15 OS=Homo sa... [more]
ARL15_BOVIN3.272e-1836.03ADP-ribosylation factor-like protein 15 OS=Bos tau... [more]
SAR1B_ARATH5.582e-1835.11GTP-binding protein SAR1B OS=Arabidopsis thaliana ... [more]
SAR1A_PIG5.582e-1830.30GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A P... [more]
SAR1A_BOVIN5.582e-1830.30GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A P... [more]
ARL10_HUMAN5.582e-1838.06ADP-ribosylation factor-like protein 10 OS=Homo sa... [more]
ARL15_MOUSE7.290e-1836.03ADP-ribosylation factor-like protein 15 OS=Mus mus... [more]
SAR1B_BRACM9.521e-1835.88GTP-binding protein SAR1B OS=Brassica campestris G... [more]
SAR1_GIALA1.624e-1734.33GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004516_G10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936893 ID=CK936893; Name=CK936893; organism=Citrus sinensis; type=EST; length=544bp
AGGGGGTTGTTGTTAAGCTAATAAGCTTCGTCCTCCACACCCCCCCCCCC
TCCCCTCTCTCTCTCGCGTTCTCTGAAGATAGTGATCCCCAGCTGGAAGA
ATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGAAAGA
GATGCGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATCT
TGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACCATTGGG
TTTAATGTGGAGACCGTTGAATATAAAAACATCAGTTTCACTGTGTGGGA
TGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTCCAGA
ACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGACCGTATT
GTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGAGCTGCG
AGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAAATGCAA
TGAATGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTCCCTC
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