CK936887

Overview
NameCK936887
Unique NameCK936887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936887 vs. ExPASy Swiss-Prot
Match: CARM1_XENLA (Histone-arginine methyltransferase CARM1 OS=Xenopus laevis GN=carm1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.233e-35
Identity = 98/284 (34.51%), Postives = 146/284 (51.41%), Query Frame = 2
Query:   14 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAE-YKDD--KIEFW--NNVYGFDMSCIKKQAMME----PLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFTAPFKLVAQRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPN*KNPRDVDIMLKYSLQGRHSA 838
            FKDKVVLDVG G+GILS F  +AGA  VYAVE S MA  A+ +V++N  ++ + V+ GK+EEI LP  +VD+IISE MGY L  E ML + L+A+ K+L  +G + P    ++L    D + Y +   K  FW   + +G D+S ++  A+ E    P+VDT D   ++          +            PF      +  +H L  +FDV F      +  ST P    THW Q    L+  +    G+ +SG++ +  N K   D+ I+ +    G  S+
Sbjct:  154 FKDKVVLDVGCGSGILSFFAVQAGARKVYAVEASSMAQHAELLVKSNNLTDRVVVIPGKVEEISLP-EQVDMIISEPMGYMLFNERMLESYLHAK-KFLKPNGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFKQPIVDTFDIRILMAKSVKYTVNFLDAKETDLHRIEIPFSFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLLQSPIFTKAGDTLSGTVLLIANKKQSYDISIVAQVDQTGSKSS 435          
BLAST of CK936887 vs. ExPASy Swiss-Prot
Match: CARMB_ARATH (Probable histone-arginine methyltransferase CARM1B OS=Arabidopsis thaliana GN=CARM1B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.575e-34
Identity = 98/282 (34.75%), Postives = 144/282 (51.06%), Query Frame = 2
Query:   14 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANG-FSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDA---EYKDDKIEFW--NNVYGFDMSCIKKQA----MMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGD-ASFTAPFKLVAQRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPN*KNPRDVDIMLKYSLQG 826
            F  +VV+DVGAG+GILS+F A AGA HVYAVE S+MA  A++++  N   +  ITV+KGKIE+IELP  K D++ISE MG  L+ E ML T + ARD++L  +G + P    +++    D        +K  FW   N YG D++ +   A      +P+VD  D   +V    +   +D + M          P K  A     IH L  +FDV F        F+T P +  THW Q    L   + +  G+ I+G L +  +      +++ L   + G
Sbjct:  185 FSGRVVVDVGAGSGILSMFAALAGAKHVYAVEASEMAEYARKLIAGNPLLAERITVIKGKIEDIELP-EKADVLISEPMGTLLVNERMLETYVIARDRFLSPNGKMFPTVGRIHMAPFADEFLFVEMANKALFWQQQNYYGVDLTPLYVSAHQGYFSQPVVDAFDPRLLVAP-SMFHVIDFTMMTEEQFYEIDIPLKFTASVCTRIHGLACWFDVLFDGSTVQRWFTTAPGAPTTHWYQIRCVLSQPIHVMAGQEITGRLHLIAHSAQSYTINLTLSAKMWG 464          
BLAST of CK936887 vs. ExPASy Swiss-Prot
Match: ANM42_ARATH (Probable protein arginine N-methyltransferase 4.2 OS=Arabidopsis thaliana GN=PRMT4.2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.963e-34
Identity = 95/305 (31.15%), Postives = 169/305 (55.41%), Query Frame = 2
Query:    5 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIED--AEYK----DDKIEFWNN-------VYGFDMSCI--------KKQAMMEPLVDTVDQNQIVTNCQLLKTMD-----ISKMGPGDASFTAPFKLVAQRNDYIHALVAYFDVTFT-----KCHKLMGFSTGP-KSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPN*KNPRDVDIMLKYSLQ 823
            K  F+ K VLDVG G+GIL+++ A+AGA  VYAVE ++MA+ A+ +V+AN   +++ V++G +E+I LP  KVD+IISEWMGYFLL E+M ++V+ ARD+WL   G++ P  A ++L  I+   A+ K    D  +  W+N        YG DM  +        +K  +   + + ++  QI+    ++K MD     +S++    ++ T+   ++   +  +     +FDV F+        + +  +T P +   THW Q V  + + + + EG+ ++  L ++ + +N R ++I L   ++
Sbjct:   66 KHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIEEVRSNVTS---VINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPINVEEGDNLNLGLLMSRSKENHRLMEIELNCEIK 366          
BLAST of CK936887 vs. ExPASy Swiss-Prot
Match: ANM7_TRYBB (Protein arginine N-methyltransferase 7 OS=Trypanosoma brucei brucei GN=PRMT7 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 60/224 (26.79%), Postives = 104/224 (46.43%), Query Frame = 2
Query:   29 VLDVGAGTGILSLFCAKAGAAHVYAVECS-QMANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIE-DAEYKDDKIEFWNNV-------------------YGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFTAPFKLVAQRNDYIHALVAYFDVT 628
            VL++GAG+G+LSL  AK GA  V AVE S ++A +A++ + AN   + + VL     E++   LP    D+++SE  G  +L E+ L+ V+  R++ L     ++P   + Y   IE DA ++   +  W ++                   YG  M+ +  + + +P+               L  +D S     D      F +VA+ +   HA++ Y+ VT
Sbjct:   99 VLEIGAGSGLLSLMAAKLGAKWVVAVEGSEELAKLARENIRANNMEHQVKVLHMMSTELKSKHLP-EPPDVLLSEIFGTMMLGESALDYVVDVRNRLLKPTTKIIPQFGTQYAVPIECDALHRISSVSGWRDLDLKHMMTLQDTVSIVFAKHYGIRMNSVNFRRLSDPIE--------------LFRVDFSSSNRNDIPRRKHFDVVAKESGTAHAMLFYWKVT 307          
BLAST of CK936887 vs. ExPASy Swiss-Prot
Match: ANM10_HUMAN (Putative protein arginine N-methyltransferase 10 OS=Homo sapiens GN=PRMT10 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 73/268 (27.24%), Postives = 125/268 (46.64%), Query Frame = 2
Query:   23 KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD------------GIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDM-SCIKKQAMMEPLVDTVDQNQ---------------IVTNCQLLKTMDISKMGPGDASFT-APFK--LVAQRNDYIHALVAYFDVTFTKCHKLMGFSTGPKSRATHWKQTVLYLEDV 721
            K VLD+GAGTGILS+F  KAGA  VYA E S+ M  +A  +V AN     I +L  K  +IE+P     +V ++++E +   L  E ++ ++++A +  L+              G V+P  A ++  A+E AE +        ++ G  + + +K Q+     VDT +  +                +T C  + T+D + +    +  T  P K  +   +   + A++ +F +     H L   ST P S  T W+Q V  ++D+
Sbjct:  179 KSVLDIGAGTGILSMFAKKAGAHSVYACELSKTMYELACDVVAANKMEAGIKLLHTKSLDIEIPKHIPERVSLVVTETVDAGLFGEGIVESLIHAWEHLLLQPKTKGESANCEKYGKVIPASAVIFGMAVECAEIRRHHRVGIKDIAGIHLPTNVKFQSPAYSSVDTEETIEPYTTEKMSRVPGGYLALTECFEIMTVDFNNLQELKSLATKKPDKIGIPVIKEGILDAIMVWFVLQLDDEHSL---STSP-SEETCWEQAVYPVQDL 442          
BLAST of CK936887 vs. ExPASy Swiss-Prot
Match: ANM10_XENLA (Putative protein arginine N-methyltransferase 10 OS=Xenopus laevis GN=prmt10 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 2
Query:   23 KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD----------GIVLPDKASLYLTAIEDAEYK 382
            K VLD+G GTGILS+F  KAGA  VYA E S+ M  +A +IV AN     I +L  K  +I++P     +V ++++E +   L  E ++ T+++A    L+            G V+P  A +Y  A+E  E +
Sbjct:  166 KTVLDIGTGTGILSMFAKKAGAPFVYACELSKTMYELACEIVTANQMDGHIKLLHMKSHDIQIPEHIPERVSLVVTETVDAGLFGEGIVETLIHAWKNLLLQPKPKDGRVEAYGKVIPSSAVIYGMAVECPEIR 299          
BLAST of CK936887 vs. ExPASy Swiss-Prot
Match: ANM7_CHICK (Protein arginine N-methyltransferase 7 OS=Gallus gallus GN=PRMT7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 47/137 (34.31%), Postives = 75/137 (54.74%), Query Frame = 2
Query:   26 VVLDVGAGTGILSLFCAKAGAAHVYAVEC-SQMANMAKQIVEANGFSNVITVLKGKIEEIEL-----PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGI-VLPDKASLYLTAIEDAEYKDDKIEFWNNVY 415
            +VLD+G GTG+LS+  A AGA   YAVE    MAN A +IVE NGF + I V+     E+ +        + +I+++E     L+ E  L T  +A  K+LV +G   +P +A++Y+  +E       ++  WN ++
Sbjct:   67 IVLDIGTGTGLLSMMAASAGADFCYAVEVFKPMANAAVKIVEKNGFGDKIKVINKHSTEVTVGPDGDMQCRANILVTELFDTELIGEGALPTYEHAH-KYLVQEGCEAVPHRATVYVQLVE-----SKRMWSWNKLF 197          
The following BLAST results are available for this feature:
BLAST of CK936887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
CARM1_XENLA3.233e-3534.51Histone-arginine methyltransferase CARM1 OS=Xenopu... [more]
CARMB_ARATH3.575e-3434.75Probable histone-arginine methyltransferase CARM1B... [more]
ANM42_ARATH7.963e-3431.15Probable protein arginine N-methyltransferase 4.2 ... [more]
ANM7_TRYBB8.568e-1226.79Protein arginine N-methyltransferase 7 OS=Trypanos... [more]
ANM10_HUMAN3.256e-1127.24Putative protein arginine N-methyltransferase 10 O... [more]
ANM10_XENLA4.252e-1135.07Putative protein arginine N-methyltransferase 10 O... [more]
ANM7_CHICK5.553e-1134.31Protein arginine N-methyltransferase 7 OS=Gallus g... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004516_H12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936887 ID=CK936887; Name=CK936887; organism=Citrus sinensis; type=EST; length=884bp
GGGCAAGTTTCTTTTCAAGGACAAAGTAGTTCTTGATGTTGGAGCCGGGA
CTGGAATTTTATCCTTATTTTGTGCAAAAGCAGGGGCAGCTCATGTTTAT
GCAGTTGAGTGCTCCCAAATGGCTAACATGGCTAAACAGATTGTCGAAGC
AAATGGATTTTCTAATGTTATAACAGTTTTAAAAGGGAAGATTGAAGAAA
TTGAGCTCCCAGTTACAAAAGTGGATATAATTATTTCAGAGTGGATGGGT
TATTTTTTGTTGTTCGAGAACATGCTAAATACAGTCTTGTATGCTCGTGA
TAAATGGCTAGTTGATGATGGAATTGTGTTACCAGATAAAGCTTCTCTCT
ATTTGACAGCCATTGAAGATGCTGAGTACAAAGATGACAAGATTGAATTT
TGGAATAACGTCTATGGCTTTGACATGAGCTGCATCAAGAAGCAAGCTAT
GATGGAACCTCTTGTTGACACAGTTGATCAGAATCAAATTGTTACCAACT
GCCAGCTACTCAAGACAATGGATATCTCCAAGATGGGACCTGGGGATGCT
TCCTTTACAGCTCCATTTAAGCTTGTGGCACAACGTAATGATTACATCCA
TGCTCTTGTAGCATATTTTGACGTAACCTTTACCAAGTGCCACAAATTAA
TGGGCTTCTCAACAGGTCCAAAATCGCGGGCTACACATTGGAAGCAAACA
GTTCTTTATCTGGAAGATGTATTAACTATTTGTGAGGGGGAGGCAATAAG
TGGGAGCTTGACTGTGGCGCCAAACTAAAAGAATCCACGAGATGTTGATA
TAATGCTGAAATATTCATTGCAGGGTAGGCATTCTGCTATTTCCAGGATC
CAATATTACAAGATGCGTTGAGTTTGGCCATTGT
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