CK936881

Overview
NameCK936881
Unique NameCK936881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936881 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11
Identity = 63/260 (24.23%), Postives = 117/260 (45.00%), Query Frame = 2
Query:   29 LQPLIFYASL-FILSALVLKAIKHSRR-LPPSPWALPIVXXXXXXXXXXXXXFHKLSTRYGPLMSVRIGSVLGVVTSCPDVTKELLKTNDVTFTGRKSSAAIECLTYNS-SFAFAPYGPYWQFMKKLSAVELLGSRTLHQFLPVRTNELRELIRFLFEKSKSGQSVNITDELLRFANNIISQMMLSIRCS-GKGGQAEECRTLAREVTEIFGEFNISDIIWI-----FKSFDIQGFNRRFKDIHXXYDSQLENIITNREK 781
            LQ  +   SL F+ + +  K +K S+R LPP P  LPIV              H+LS ++GP+M +++G V  V+ S  +  +E LKT+D+    R ++ A    + N+ +     Y   W+ ++K++  E    + +  F  VR  E   +++ L + +     V+++  L   A + + + +     S  K    E+   L  E  +    F  SD+  I     F  F + G ++    +    D+ L ++I + +K
Sbjct:    4 LQSFLLLLSLPFLFTLIYTKKMKESKRNLPPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIEELVFEAQKSL-TFKFSDLFPIPGLGWFIGF-VSGQHKGLHKVFIEVDNFLNHMIDDHQK 261          
BLAST of CK936881 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11
Identity = 49/199 (24.62%), Postives = 89/199 (44.72%), Query Frame = 2
Query:  209 LMSVRIGSVLGVVTSCPDVTKELLKTNDVTFTGRKSSAAIECLTYNSSFAFAPYGPYWQFMKKLSAVELLGSRTLHQFLPVRTNELRELIRFLFEKSKSGQSVNITDELLRFANNIISQMMLSIR---CSGKG-GQAEECRTLAREVTEIFGEFNISD-IIWIFKSFDIQGFNRRFKDIHXXYDSQLENIITNREKLRK 790
            LM+  +G    VV+SCP   +E+L     +F  R    +   L +  +  FAP G YW+ ++++++  L   R +    P R  +   ++R +  +  +  +V +   L   A N I   +   R    SG G  +AE  +++ RE  E+ G FN SD + W+   +D     RR   +     + +  +I    + R+
Sbjct:  110 LMAFSVGDTPAVVSSCPATAREVLA--HPSFADRPVKRSARELMFARAIGFAPNGEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSASGAVALRPHLQAAALNNIMGSVFGTRYDVTSGAGAAEAEHLKSMVREGFELLGAFNWSDHLPWLAHLYDPSNVTRRCAALVPRVQTFVRGVIDEHRRRRQ 306          
BLAST of CK936881 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11
Identity = 45/175 (25.71%), Postives = 81/175 (46.29%), Query Frame = 2
Query:  104 RLPPSPWALPIVXXXXXXXXXXXXXFHKLSTRYGPLMSVRIGSVLGVVTSCPDVTKELLKTNDVTFTGR-KSSAAIECLTYNSSFAFAPYGPYWQFMKKLSAVELLGSRTLHQFLPVRTNELRELIRFLFEKSKS----GQSVNITDELLRFANNIISQMMLSIRCSGKGGQAEE 613
            +LPP P   P+V             F + +  YGP++SV  GS L V+ S  ++ KE+LK +D     R +S +A +         +A YGP++  ++K+  +EL   + L    P+R +E+  ++  ++    S    G+ + +   L   A N I+++    R     G  +E
Sbjct:   27 KLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDE 201          
The following BLAST results are available for this feature:
BLAST of CK936881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
C71BP_ARATH1.604e-1124.23Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C78A1_MAIZE4.668e-1124.62Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C98A2_SOYBN6.097e-1125.71Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004516_H06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936881 ID=CK936881; Name=CK936881; organism=Citrus sinensis; type=EST; length=794bp
GGGCTAGAGATCTTTTCTAGCCATGGCACTTCAACCACTGATTTTTTATG
CTTCCCTCTTCATCTTGTCCGCCCTAGTGCTGAAAGCCATCAAACACTCA
CGGCGACTGCCACCGAGCCCGTGGGCCTTGCCGATCGTCGGGCACCTCCA
TCTCCTCGGCCCTTCCCTTCACCATTCTTTTCACAAGCTTTCAACTCGTT
ATGGCCCCTTGATGTCCGTACGCATAGGCTCTGTCCTAGGTGTTGTAACT
TCTTGTCCTGATGTAACCAAAGAGCTTCTCAAAACAAATGATGTTACTTT
TACCGGCCGGAAAAGCTCTGCCGCCATTGAATGCCTTACATATAACTCTT
CTTTTGCTTTCGCTCCCTATGGCCCATATTGGCAATTCATGAAAAAGCTG
TCCGCAGTTGAGCTCTTGGGCAGCAGAACCCTTCACCAGTTTCTACCTGT
TCGAACAAATGAGTTGCGCGAGCTTATTCGGTTTCTATTTGAGAAGTCTA
AATCTGGCCAAAGTGTTAATATTACAGATGAATTGTTGAGATTTGCAAAC
AATATAATATCTCAAATGATGTTGAGCATTAGATGTTCAGGAAAGGGGGG
CCAGGCTGAAGAGTGTAGAACCCTGGCTCGTGAAGTGACTGAAATTTTTG
GCGAGTTTAATATCTCTGACATTATTTGGATTTTCAAAAGCTTTGATATT
CAGGGTTTTAACAGGAGATTCAAGGATATTCATCNNNNGTACGATTCGCA
GCTGGAGAATATCATAACAAATCGTGAAAAATTAAGGAAGGAGA
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