CK936866

Overview
NameCK936866
Unique NameCK936866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_LACSA (Cytochrome b6 OS=Lactuca sativa GN=petB PE=3 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.469e-98
Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_JASNU (Cytochrome b6 OS=Jasminum nudiflorum GN=petB PE=3 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.469e-98
Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAVKIVTGVPEAIPVIG+PLVELLRGSASVGQSTLTRF
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGAPLVELLRGSASVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_DRIGR (Cytochrome b6 OS=Drimys granadensis GN=petB PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.918e-98
Identity = 176/183 (96.17%), Postives = 180/183 (98.36%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIF+CLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRF
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFHCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_ANTFO (Cytochrome b6 OS=Anthoceros formosae GN=petB PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.918e-98
Identity = 173/183 (94.54%), Postives = 178/183 (97.27%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVA+GFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIP++GS LVELLRGS SVGQSTLTRF
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVASGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPLVGSSLVELLRGSVSVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_PINTH (Cytochrome b6 OS=Pinus thunbergii GN=petB PE=3 SV=2)

HSP 1 Score: 358.607 bits (919), Expect = 2.506e-98
Identity = 174/183 (95.08%), Postives = 178/183 (97.27%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            + KVYD FEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQY+MTEVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS SVGQSTLTRF
Sbjct:    1 MGKVYDRFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYLMTEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_PINKO (Cytochrome b6 OS=Pinus koraiensis GN=petB PE=3 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.506e-98
Identity = 174/183 (95.08%), Postives = 178/183 (97.27%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            + KVYD FEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQY+MTEVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGS SVGQSTLTRF
Sbjct:    1 MGKVYDRFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYLMTEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_ADICA (Cytochrome b6 OS=Adiantum capillus-veneris GN=petB PE=2 SV=2)

HSP 1 Score: 357.451 bits (916), Expect = 5.582e-98
Identity = 172/183 (93.99%), Postives = 178/183 (97.27%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQ+ATGFAMTFYYRPTVTEAF+SVQYIMTEVNFGWLIRSVHRWSASMMVL+ ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIP IGS LVELLRGS SVGQSTLTRF
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQIATGFAMTFYYRPTVTEAFSSVQYIMTEVNFGWLIRSVHRWSASMMVLVMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPFIGSSLVELLRGSVSVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_ZYGCR (Cytochrome b6 OS=Zygnema circumcarinatum GN=petB PE=3 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 9.521e-98
Identity = 168/183 (91.80%), Postives = 178/183 (97.27%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            + KVYDWFEERLEIQ+IADDITSKYVPPHVNIFYCLGGITLTCF++QVATGFAMTFYYRPTVTEAFASVQYIMT+VNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+L VLT SFGVTGYSLPWDQIGYWAVKIVTGVP+AIPV+GSP+VELLRGS SVGQ+TLTRF
Sbjct:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCLGGITLTCFIIQVATGFAMTFYYRPTVTEAFASVQYIMTDVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILGVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVVGSPIVELLRGSVSVGQTTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_NEPOL (Cytochrome b6 OS=Nephroselmis olivacea GN=petB PE=3 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 2.121e-97
Identity = 166/183 (90.71%), Postives = 178/183 (97.27%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            ++K+YDWFEERLEIQAIADDITSKYVPPHVNIFYC GGITLTCFL+QVATGFAMTFYYRPTVTEAFASV+YIMT VNFGWLIRS+HRWSASMMV+M ILHVFRVYLTGGFKKPRELTWVTGV+LAV+T SFGVTGYSLPWDQ+GYWAVKIVTGVP+AIPVIG+PLVELLRGS SVGQSTLTRF
Sbjct:    1 MSKIYDWFEERLEIQAIADDITSKYVPPHVNIFYCFGGITLTCFLIQVATGFAMTFYYRPTVTEAFASVEYIMTNVNFGWLIRSIHRWSASMMVMMLILHVFRVYLTGGFKKPRELTWVTGVILAVITVSFGVTGYSLPWDQVGYWAVKIVTGVPDAIPVIGAPLVELLRGSVSVGQSTLTRF 183
[Close]
BLAST of CK936866 vs. ExPASy Swiss-Prot
Match: CYB6_SPIMX (Cytochrome b6 OS=Spirogyra maxima GN=petB PE=3 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 4.725e-97
Identity = 167/183 (91.26%), Postives = 177/183 (96.72%), Query Frame = 2 
Query:  299 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRF 847
            + K+YDWFEERLEIQAIADDI SKYVPPHVNIFYCLGGITLTCFL+QVATGFAMTFYYRPTV EAFASVQYIMT+VNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVP+AIP+IG+P+VELLRGS SVGQ+TLTRF
Sbjct:    1 MGKIYDWFEERLEIQAIADDIISKYVPPHVNIFYCLGGITLTCFLIQVATGFAMTFYYRPTVAEAFASVQYIMTDVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPDAIPIIGAPIVELLRGSVSVGQTTLTRF 183
The following BLAST results are available for this feature:
BLAST of CK936866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYB6_LACSA1.469e-9896.17Cytochrome b6 OS=Lactuca sativa GN=petB PE=3 SV=1[more]
CYB6_JASNU1.469e-9896.17Cytochrome b6 OS=Jasminum nudiflorum GN=petB PE=3 ... [more]
CYB6_DRIGR1.918e-9896.17Cytochrome b6 OS=Drimys granadensis GN=petB PE=3 S... [more]
CYB6_ANTFO1.918e-9894.54Cytochrome b6 OS=Anthoceros formosae GN=petB PE=2 ... [more]
CYB6_PINTH2.506e-9895.08Cytochrome b6 OS=Pinus thunbergii GN=petB PE=3 SV=... [more]
CYB6_PINKO2.506e-9895.08Cytochrome b6 OS=Pinus koraiensis GN=petB PE=3 SV=... [more]
CYB6_ADICA5.582e-9893.99Cytochrome b6 OS=Adiantum capillus-veneris GN=petB... [more]
CYB6_ZYGCR9.521e-9891.80Cytochrome b6 OS=Zygnema circumcarinatum GN=petB P... [more]
CYB6_NEPOL2.121e-9790.71Cytochrome b6 OS=Nephroselmis olivacea GN=petB PE=... [more]
CYB6_SPIMX4.725e-9791.26Cytochrome b6 OS=Spirogyra maxima GN=petB PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_B11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936866 ID=CK936866; Name=CK936866; organism=Citrus sinensis; type=EST; length=848bp
GCGGGACTCAAANNNACAAATCAAAGAAAATGNNNTAGGTAAATAGAAGA
TTCAAGAGGCCTGTAACGATCAACATAAAGATAAGCGCGTCGACTTGATT
TTTTGGCATTCTAATTATAACCACAAAGAAAAGCTTTCTTATTTTTATTC
TTTCGTATTTTTAGATAAGATTGAATCAAAAAATTAAGAAGTTTCCAATT
TTCTATTCCATACCAGTATTGGGGTGGTTTTGTTTGAGCCGTACGAGATG
AAATTCTCATATACGGTTCTCAGAGGGGAGTTCTCTTGGTTTACCTATCT
CAATAAAGTCTACGATTGGTTCGAAGAACGTCTCGAGATTCAGGCGATTG
CAGATGATATAACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTAT
TGTCTGGGAGGAATTACGCTCACTTGTTTTTTAGTACAAGTAGCTACAGG
GTTTGCTATGACTTTTTACTACCGCCCGACCGTTACTGAGGCTTTTGCCT
CTGTTCAATACATAATGACGGAAGTTAACTTCGGGTGGTTAATTCGATCG
GTTCATCGATGGTCGGCAAGTATGATGGTCCTAATGACAATCCTGCACGT
ATTTCGCGTGTATCTCACCGGGGGTTTTAAAAAACCTCGCGAATTGACTT
GGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCTTTTGGTGTAACA
GGTTATTCTTTACCTTGGGACCAAATTGGATATTGGGCAGTAAAAATTGT
AACAGGCGTGCCCGAAGCAATTCCGGTAATAGGATCGCCTTTGGTAGAGT
TATTACGCGGAAGTGCTAGTGTGGGACAGTCCACTTTGACTCGTTTTT
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