CK936847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_YARLI (FACT complex subunit SPT16 OS=Yarrowia lipolytica GN=SPT16 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.651e-27 Identity = 81/233 (34.76%), Postives = 121/233 (51.93%), Query Frame = 3 Query: 9 VGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQNQ-TNEPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAE----------ANGTEALPSKTTLR------SDNQEISKEELRRQHQ----AELARQKNEE 644 +G+RY YCSN+ R+F+I+ T Q + YEVL+ E ++K G K Y AA+S ++ +AP+L +L K+ G IG++FR++ LNAK R F+VS+GFQNL N +PKN+ +SL L DTV V V+T + A+ +V Y F + K K E A T + ++T LR +N + K++ + H+ A L R KN E Sbjct: 272 LGTRYKGYCSNVGRTFMINPTKAQEQNYEVLVGLREKVFDSIKVGAKACDVYNAAVSYIKSKAPKLEAHLLKTIGWSIGIDFRDAKFLLNAKCQREIVDGSTFDVSLGFQNLTNSAATDPKNKTYSLALVDTVRVTRAGVAVLTDSAPVALSEVTYFFEDDDEDAEKEKKKKEQAKKEKKQQQAAATVSSITRTKLRHEARAEDNNDQKRKDDQKALHEKLNKAGLERFKNTE 504
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_EMENI (FACT complex subunit spt16 OS=Emericella nidulans GN=spt16 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.816e-27 Identity = 71/218 (32.57%), Postives = 111/218 (50.92%), Query Frame = 3 Query: 12 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQN-QTNEPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALP---SKTTLRSDNQ---EISKEELRRQHQAELARQKNEE 644 G RY +Y S I R++L+D T Q Y +LL HEA + + G Y A+ +V PEL + K+ G GIG+E R+S + LN KN RV K+ M F++++G +++ + K ++S+++ DTV VGE P V T + + V++ F K K E + ++T LR++ E RR+HQ ELA +K +E Sbjct: 284 GIRYKTYSSIIGRTYLVDPTKSQEANYSLLLSVHEAVLKEARDGVVAKELYNKAIGIVRARKPELESHFVKNVGAGIGIELRDSNMILNGKNTRVLKSGMTFSITVGLVDVEEPSVKDKKKNVYSMMITDTVRVGEQGPHVFTKDAGIDMDSVSFYFGDEEEPQKPAKEKKETKSSAIASRNVTRTKLRAERPTQVNEGAEARRREHQKELAAKKTKE 501
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_DEBHA (FACT complex subunit SPT16 OS=Debaryomyces hansenii GN=SPT16 PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.677e-27 Identity = 75/214 (35.05%), Postives = 117/214 (54.67%), Query Frame = 3 Query: 6 AVGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGAL-KPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQN-QTNEPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPSKTTLRSD--------NQEISKEELRRQHQA 617 ++G RY SYCSN+AR+F ID TP Y+ LLK L + G S YQ AL ++ E P+LV + TK+ G +G+EFR+S LN+KN+R + I ++++GF NL N + + PK + +SL+L DT V E+ P ++T KA + ++ F VK+E G + L S+ ++++ N +I K +LR + A Sbjct: 284 SLGLRYKSYCSNVARTFFIDPTPAMETNYDFLLKLQNHVTSTLLRDGTVASQVYQGALDFIKSEKPDLVQHFTKNCGWLMGIEFRDSTFVLNSKNERKLQNGQIISLTLGFSNLTNDKASNPKLKQYSLILTDTFKVSESEPILLT-TYPKARSETSFYFKDDEP----TAVKSENGGDKKLKSEKNIKTEKNLAANEANSKILKSKLRHESSA 492
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_NEUCR (FACT complex subunit spt-16 OS=Neurospora crassa GN=spt-16 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.272e-27 Identity = 76/221 (34.39%), Postives = 116/221 (52.49%), Query Frame = 3 Query: 6 AVGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQNQTNEPKN-QMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPSK----TTLRSDNQEISKEEL---RRQHQAELARQKNEE 644 A+G RY SYCS IAR+F++D Q Y+ LL H + ++ G V Y A + V + P+L + K+ G GIGLE ++ L LN KN R K M V+ GF ++QN + KN +++SL+L+DT+ V + P V T ++ V ++ F PK + + A+ +K T LRS+ E+ RR+HQ ELA++K +E Sbjct: 286 AMGLRYKSYCSQIARTFMVDPNKSQESNYKFLLAVHNLILKEIRDGAIVKDVYTKAYNFVRSKKPDLEKHFLKNVGFGIGLENKDPTLILNNKNTRTLKDGMTLVVTTGFSDIQNPNPQDKNSKVYSLILSDTIRVTSSEPVVFTGEAPVDVDATSFFFKDEEEAQPTPKKEKRDSRVGAVATKNITSTRLRSERNTTVDEDADKRRREHQKELAQKKQKE 506
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_ASPFU (FACT complex subunit spt16 OS=Aspergillus fumigatus GN=spt16 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.070e-26 Identity = 74/219 (33.79%), Postives = 119/219 (54.34%), Query Frame = 3 Query: 12 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQN-QTNEPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPS----KTTLRSDN-QEISK--EELRRQHQAELARQKNEE 644 G RY +Y S IAR++L+D + Q Y LL HEA + ++ G Y A++++ + PEL + KS G GIG+E R+ + LN KN R K+ M ++++G ++++ + K+ +S+++ DTV VGEN P V T + + V++ F K K EA T A+ S +T LR++ +I++ E RR+HQ ELA +K E Sbjct: 283 GIRYKTYSSMIARTYLVDPSKSQETNYAFLLALHEAVMRDVRDGTIAKDLYNKAINLIRTKKPELESHFVKSVGAGIGIELRDPNMVLNGKNSRTLKSGMTLSITVGLTDVEDPELKGSKSSTYSMIITDTVRVGENGPHVFTKDAGLDMDSVSFYFGDEEEPQKPIKEKKEAK-TSAIASRNITRTKLRAERPTQINEGAEARRREHQKELAAKKTRE 500
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_ASPOR (FACT complex subunit spt16 OS=Aspergillus oryzae GN=spt16 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.384e-26 Identity = 68/218 (31.19%), Postives = 115/218 (52.75%), Query Frame = 3 Query: 12 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQNQTNEPKN-QMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANG---TEALPSKTTLRSDNQ---EISKEELRRQHQAELARQKNEE 644 G RY +Y S IAR++L+D + Q Y LL H+ + ++ G + A+ +V + PEL + KS G GIG+E R+S + LN KN+++ K+ M ++++G +++ ++ KN ++S+++ DTV VGEN P + T + + V++ F K K E T ++T LR++ E RR+HQ ELA +K +E Sbjct: 305 GIRYKTYSSIIARTYLVDPSKSQEANYAFLLNLHDTVMKDVRDGTMAKDLFNKAIGLVRAKKPELESHFVKSVGAGIGIELRDSNMVLNGKNNKILKSGMTLSITVGLTDVEELESKDKNTAVYSMIITDTVRVGENGPHIFTKDAGIDMDSVSFYFGDEEEPQKPAKEKKEVKSNAMTSRNVTRTKLRAERPTQVNEGAEARRREHQKELATKKTKE 522
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_USTMA (FACT complex subunit SPT16 OS=Ustilago maydis GN=SPT16 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.442e-25 Identity = 70/219 (31.96%), Postives = 117/219 (53.42%), Query Frame = 3 Query: 6 AVGSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAH-EAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQNQTNEPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEAN-GTEALPSKTTLRSDNQEISKE----ELRRQHQAELARQKNEE 644 ++G +Y +YCSNI R++LID Q K+Y L + + A L+ G Y A+ +V + +LV + K+ G GIGLEFR+S L+AKN+R + M+ N+S+GFQ+L + + K +++SLLL DT+ + +N P + D+++ F + ++ A + P LR+ N+ + + E + HQ ELA+QK E+ Sbjct: 288 SMGIKYRNYCSNIGRTYLIDPHNSQQKMYAFLHEIQTQLADKHLRAGATCKEIYSKAVEIVRAKDEKLVASFVKNVGFGIGLEFRDSAYVLSAKNNRALQRDMVVNLSVGFQDLDDPNH--KGEVYSLLLIDTLRINDNAPATFLTDRVRGTNDMSFFFKDDEEEEEEEERRSPAKPDGKVTPGGKVLRNKNRGAAHDDTAAEKMKLHQKELAKQKQED 504
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_YEAST (FACT complex subunit SPT16 OS=Saccharomyces cerevisiae GN=SPT16 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.871e-25 Identity = 74/218 (33.94%), Postives = 112/218 (51.38%), Query Frame = 3 Query: 12 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAH-EAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKND-RVAKAKMIFNVSIGFQNLQNQTNEPKNQMFSLLLADTVIV--GENNPEVVTCKSSKAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPSKTT----------LRSDNQEISKEELRRQHQAEL 623 G RYN+YCSNI R+FLID + + Y+ LL E LKPG Y++ + +E+ PELVPN TK+ G+ IGLEFR+S LN KND R + FN+S GF NL++ + ++L LADTV + E P +KA +++ FN + K + A + P + + R ++ KE++R+++Q +L Sbjct: 291 GIRYNNYCSNITRTFLIDPSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQRGDCFNISFGFNNLKDSQSA---NNYALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEEEDNNKKK-SSPATKVPSKPDRNSKILRTKLRGEARGGAEDAQKEQIRKENQKKL 504
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_CANGA (FACT complex subunit SPT16 OS=Candida glabrata GN=SPT16 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.491e-24 Identity = 75/221 (33.94%), Postives = 121/221 (54.75%), Query Frame = 3 Query: 12 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAI-GALKPGNKVSAAYQAALSVVEREAPELVPNLTKSAGTGIGLEFRESGLNLNAKND-RVAKAKMIFNVSIGFQNLQNQTNEPKNQMFSLLLADTVIVGENNPEVVTCKSSKAVKDVAYSFNXXXXXXXR-----PKVKAEANG-TEALPSKT--TLRSDNQEISKEELRRQHQAELARQKNEE 644 G RYN+YCSN R+FLID + Y LL + I LK G Y++ + +++ PEL N TK+ G+ IGLEFR+S LN+KND R + FN+S GF L++ N ++L LADTVI+ E+ P+++T + +K+ V++ FN + K+ +G ++ L SK R ++Q+ KE++R+++Q +L + +E Sbjct: 291 GIRYNNYCSNTTRTFLIDPSEEMVNNYVFLLDLQKHIIENELKAGRTGKEVYESVVEFIKKVRPELAGNFTKNIGSLIGLEFRDSFFVLNSKNDKRKIQVGDCFNISFGFNALKDMKT---NTNYALQLADTVILNEDGPKILT-EYTKSKSQVSFYFNNDEVEKEKKPAASTKIPTNLDGNSKILRSKLRGDARGESQDAQKEQIRKENQRKLHEKLQKE 507
BLAST of CK936847 vs. ExPASy Swiss-Prot
Match: SPT16_CAEEL (FACT complex subunit spt-16 OS=Caenorhabditis elegans GN=spt-16 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23 Identity = 70/218 (32.11%), Postives = 111/218 (50.92%), Query Frame = 3 Query: 12 GSRYNSYCSNIARSFLIDATPLQSKVYEVLLKAHEAAIGALKPGNKVSAAYQAALSVVEREAPELVPNLT-KSAGTGIGLEFRESGLNLNAKNDRVAKAKMIFNVSIGFQNLQNQTNEPKNQMFSLLLADTVIV-GENNPEVVTCKSSKAVKDVAYSF------NXXXXXXXRPKVKAEANGTEALPSKTTLRSDNQEISKEELRRQHQAELARQKNE 641 G+R + YC+N+ R+ LI + YE +L A A I ALKPG K+S Y+ + + ++P+L L K G G+EFRES L ++AK D V KA M+F V IG ++ N+ K + ++ ++DT++V E + E++T K+ +K F + K+ + L +T ++ N EELR++ Q EL Q NE Sbjct: 275 GARLSEYCTNLTRTMLIFPSSELETAYEAILAAELAVIAALKPGAKLSDVYKIGIDTLTEKSPKLAETLNKKELGFATGIEFRESRLAISAKCDEVVKAGMVFIVYIGVDSIPNKNKGEKGKPAAIAISDTILVKEEGDNEILTEKAKSRLKSNVIKFKEEQENREAEKDNDQKKMLGRGQRSVVLTDQTRNKTTN-----EELRKERQKELGVQLNE 487 The following BLAST results are available for this feature:
BLAST of CK936847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936847 ID=CK936847; Name=CK936847; organism=Citrus sinensis; type=EST; length=811bpback to top |