CK936841

Overview
NameCK936841
Unique NameCK936841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_HELAN (Cytochrome b6 OS=Helianthus annuus GN=petB PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.986e-79
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_AGRST (Cytochrome b6 OS=Agrostis stolonifera GN=petB PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.986e-79
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAF+SVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_PANGI (Cytochrome b6 OS=Panax ginseng GN=petB PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.818e-79
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_LOTJA (Cytochrome b6 OS=Lotus japonicus GN=petB PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.818e-79
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_DAUCA (Cytochrome b6 OS=Daucus carota GN=petB PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.818e-79
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_ARATH (Cytochrome b6 OS=Arabidopsis thaliana GN=petB PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.818e-79
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_VITVI (Cytochrome b6 OS=Vitis vinifera GN=petB PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPRDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_NYMAL (Cytochrome b6 OS=Nymphaea alba GN=petB PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIF+CL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFHCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_JASNU (Cytochrome b6 OS=Jasminum nudiflorum GN=petB PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPRDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_GOSHI (Cytochrome b6 OS=Gossypium hirsutum GN=petB PE=3 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPRDQIGYWAV 148
The following BLAST results are available for this feature:
BLAST of CK936841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYB6_HELAN5.986e-7995.27Cytochrome b6 OS=Helianthus annuus GN=petB PE=3 SV... [more]
CYB6_AGRST5.986e-7995.27Cytochrome b6 OS=Agrostis stolonifera GN=petB PE=3... [more]
CYB6_PANGI7.818e-7995.27Cytochrome b6 OS=Panax ginseng GN=petB PE=3 SV=1[more]
CYB6_LOTJA7.818e-7995.27Cytochrome b6 OS=Lotus japonicus GN=petB PE=3 SV=1[more]
CYB6_DAUCA7.818e-7995.27Cytochrome b6 OS=Daucus carota GN=petB PE=3 SV=1[more]
CYB6_ARATH7.818e-7995.27Cytochrome b6 OS=Arabidopsis thaliana GN=petB PE=3... [more]
CYB6_VITVI1.021e-7895.27Cytochrome b6 OS=Vitis vinifera GN=petB PE=3 SV=1[more]
CYB6_NYMAL1.021e-7895.27Cytochrome b6 OS=Nymphaea alba GN=petB PE=3 SV=1[more]
CYB6_JASNU1.021e-7895.27Cytochrome b6 OS=Jasminum nudiflorum GN=petB PE=3 ... [more]
CYB6_GOSHI1.021e-7895.27Cytochrome b6 OS=Gossypium hirsutum GN=petB PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_C12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936841 ID=CK936841; Name=CK936841; organism=Citrus sinensis; type=EST; length=732bp
AAATAACAAATCAAAGAAAATGAAATAGGTAAATAGAAGATTCAAGAGGC
CTGTAACGATCAACATAAAGATAAGCGCGTCGACTTGATTTTTTGGCATT
CTAATTATAACCACAAAGAAAAGCTTTCTTATTTTTATTCTTTCGTATTT
TTAGATAAGATTGAATCAAAAAATTAAGAAGTTTCCAATTTTCTATTCCA
TACCAGTATTGGGGTGGTTTTGTTTGAGCCGTACGAGATGAAATTCTCAT
ATACGGTTCTCAGAGGGGAGTTCTCTTGGTTTACCTATCTCAATAAAGTC
TACGATTGGTTCGAAGAACGTCTCGAGATTCAGGCGATTGCAGATGATAT
AACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTGNNNG
GAATTACGCTCACTTGTTTTTTAGTACAAGTAGCTACAGGGTTTGCTATG
ACTTTTTACTACCGCCCGACCGTTACTGAGGCTTTTGCCTCTGTTCAATA
CATAATGACGGAAGTTAACTTCGGGTGGTTAATTCGATCGGTTCATCGAT
GGTCGGCAAGTATGATGGTCCTAATGACAATCCTGCACGTATTTCGCGTG
TATCTCACCGGGGGTTTTAAAAAACCTCGCGAATTGACTTGGGTTACAGG
TGTGGTTCTGGCTGTATTGACCGCATCTTTTGGTGTAACAGGTTATTCTT
TACCTTGCGACCAAATTGGATATTGGGCAGTA
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