CK936841

Overview
NameCK936841
Unique NameCK936841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_GOSBA (Cytochrome b6 OS=Gossypium barbadense GN=petB PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPRDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CHAVU (Cytochrome b6 OS=Chara vulgaris GN=petB PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCF+VQVATGFAMTFYYRPTVTEAFAS+QYIMTEVNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTW+TGVVLAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFIVQVATGFAMTFYYRPTVTEAFASIQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWITGVVLAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CALFG (Cytochrome b6 OS=Calycanthus floridus var. glaucus GN=petB PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIF+CL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFHCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_PHYPA (Cytochrome b6 OS=Physcomitrella patens GN=petB PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.333e-78
Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + +VYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLM ILH+FRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGRVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHIFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_MARPO (Cytochrome b6 OS=Marchantia polymorpha GN=petB PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.333e-78
Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAF+SVQYIMTEVNFGWLIRSVHRWSASMMVLM ILH+FRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHIFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_DRIGR (Cytochrome b6 OS=Drimys granadensis GN=petB PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.333e-78
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIF+CL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFHCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_ANTFO (Cytochrome b6 OS=Anthoceros formosae GN=petB PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.333e-78
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVA+GFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVASGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_PEA (Cytochrome b6 OS=Pisum sativum GN=petB PE=2 SV=3)

HSP 1 Score: 292.352 bits (747), Expect = 1.742e-78
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTA+FGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTATFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_WELMI (Cytochrome b6 OS=Welwitschia mirabilis GN=petB PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.275e-78
Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIM EVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMVEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_POPAL (Cytochrome b6 OS=Populus alba GN=petB PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.275e-78
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQ IADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQTIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAV 148
The following BLAST results are available for this feature:
BLAST of CK936841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYB6_GOSBA1.021e-7895.27Cytochrome b6 OS=Gossypium barbadense GN=petB PE=3... [more]
CYB6_CHAVU1.021e-7893.92Cytochrome b6 OS=Chara vulgaris GN=petB PE=3 SV=1[more]
CYB6_CALFG1.021e-7895.27Cytochrome b6 OS=Calycanthus floridus var. glaucus... [more]
CYB6_PHYPA1.333e-7893.92Cytochrome b6 OS=Physcomitrella patens GN=petB PE=... [more]
CYB6_MARPO1.333e-7893.92Cytochrome b6 OS=Marchantia polymorpha GN=petB PE=... [more]
CYB6_DRIGR1.333e-7895.27Cytochrome b6 OS=Drimys granadensis GN=petB PE=3 S... [more]
CYB6_ANTFO1.333e-7894.59Cytochrome b6 OS=Anthoceros formosae GN=petB PE=2 ... [more]
CYB6_PEA1.742e-7894.59Cytochrome b6 OS=Pisum sativum GN=petB PE=2 SV=3[more]
CYB6_WELMI2.275e-7893.92Cytochrome b6 OS=Welwitschia mirabilis GN=petB PE=... [more]
CYB6_POPAL2.275e-7894.59Cytochrome b6 OS=Populus alba GN=petB PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_C12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936841 ID=CK936841; Name=CK936841; organism=Citrus sinensis; type=EST; length=732bp
AAATAACAAATCAAAGAAAATGAAATAGGTAAATAGAAGATTCAAGAGGC
CTGTAACGATCAACATAAAGATAAGCGCGTCGACTTGATTTTTTGGCATT
CTAATTATAACCACAAAGAAAAGCTTTCTTATTTTTATTCTTTCGTATTT
TTAGATAAGATTGAATCAAAAAATTAAGAAGTTTCCAATTTTCTATTCCA
TACCAGTATTGGGGTGGTTTTGTTTGAGCCGTACGAGATGAAATTCTCAT
ATACGGTTCTCAGAGGGGAGTTCTCTTGGTTTACCTATCTCAATAAAGTC
TACGATTGGTTCGAAGAACGTCTCGAGATTCAGGCGATTGCAGATGATAT
AACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTGNNNG
GAATTACGCTCACTTGTTTTTTAGTACAAGTAGCTACAGGGTTTGCTATG
ACTTTTTACTACCGCCCGACCGTTACTGAGGCTTTTGCCTCTGTTCAATA
CATAATGACGGAAGTTAACTTCGGGTGGTTAATTCGATCGGTTCATCGAT
GGTCGGCAAGTATGATGGTCCTAATGACAATCCTGCACGTATTTCGCGTG
TATCTCACCGGGGGTTTTAAAAAACCTCGCGAATTGACTTGGGTTACAGG
TGTGGTTCTGGCTGTATTGACCGCATCTTTTGGTGTAACAGGTTATTCTT
TACCTTGCGACCAAATTGGATATTGGGCAGTA
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