CK936841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SYNBO (Cytochrome b OS=Synaptomys borealis GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 39/120 (32.50%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 367 PPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 P +++ ++ + C ++Q+ TG + +Y T AF+SV +I +VN+GWLIR +H ASM + LHV R G + TW G+VL + GY LP Q+ +W Sbjct: 24 PSNISSWWNFGSLLGLCLMIQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGVYYGSYNMIE--TWNMGIVLLFAVMATAFMGYVLPWGQMSFW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SMIMA (Cytochrome b OS=Sminthopsis macroura GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 1 Query: 367 PPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 P +++ ++ + C ++Q+ TG + +Y AF+SV +I +VN+GWLIR++H ASM + LHV R G + TW GV+L + + GY LP Q+ +W Sbjct: 24 PSNISAWWNFGSLLGICLMIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKE--TWNIGVILLLTVMATAFVGYVLPWGQMSFW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SMILO (Cytochrome b OS=Sminthopsis longicaudata GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 1 Query: 367 PPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 P +++ ++ + C ++Q+ TG + +Y AF+SV +I +VN+GWLIR++H ASM + LHV R G + TW GV+L + + GY LP Q+ +W Sbjct: 24 PSNISAWWNFGSLLGICLMIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKE--TWNIGVILLLTVMATAFVGYVLPWGQMSFW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SMIAR (Cytochrome b OS=Sminthopsis archeri GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 1 Query: 367 PPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 P +++ ++ + C ++Q+ TG + +Y AF+SV +I +VN+GWLIR++H ASM + LHV R G + TW GV+L + + GY LP Q+ +W Sbjct: 24 PSNISAWWNFGSLLGVCLVIQILTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNLHANGASMFFMCLFLHVGRGIYYGSYLYKE--TWNIGVILLLTVMATAFVGYVLPWGQMSFW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SCOJU (Cytochrome b OS=Scolomys juruaense GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 1 Query: 367 PPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 P +++ ++ + C ++Q+ TG + +Y T AF+SV +I +VN+GWLIR +H ASM + +HV R G TW G++L + T + GY LP Q+ +W Sbjct: 24 PSNISSWWNFGSLLGICLMIQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYIHANGASMFFICLFIHVGRGIYYGXXMLNE--TWNIGIILFLTTMATAFVGYVLPWGQMSFW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SALTR (Cytochrome b OS=Salmo trutta GN=mt-cyb PE=3 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 343 DDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 D + P ++++++ + C Q+ TG + +Y ++ AF+SV +I +V++GWLIR++H AS + +H+ R G + TW GVVL +LT GY LP Q+ +W Sbjct: 16 DALVDLPAPSNISVWWNFGSLLGLCLATQILTGLFLAMHYTSDISTAFSSVCHICRDVSYGWLIRNIHANGASFFFICIYMHIARGLYYGSYLYKE--TWNIGVVLLLLTMMTAFVGYVLPWGQMSFW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SALSA (Cytochrome b OS=Salmo salar GN=mt-cyb PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 343 DDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 D + P ++++++ + C Q+ TG + +Y ++ AF+SV +I +V++GWLIR++H AS + +H+ R G + TW GVVL +LT GY LP Q+ +W Sbjct: 16 DALVDLPAPSNISVWWNFGSLLGLCLATQILTGLFLAMHYTSDISTAFSSVCHICRDVSYGWLIRNIHANGASFFFICIYMHIARGLYYGSYLYKE--TWNIGVVLLLLTMMTAFVGYVLPWGQMSFW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SAISC (Cytochrome b OS=Saimiri sciureus GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 367 PPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 P +++ ++ L + C ++Q+ TG + +Y P AF+SV +I +VN GW IR +H ASM LH+ R G F RE TW G +L + T + GY LP Q+ W Sbjct: 24 PSNISFWWNLGSLLGACLIIQITTGLFLAMHYTPDTQTAFSSVAHITRDVNHGWTIRYMHANGASMFFTCLFLHIGRGLYYGSFLS-RE-TWNIGTILLLTTMATAFMGYVLPWGQMSLW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_SAIBB (Cytochrome b OS=Saimiri boliviensis boliviensis GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 367 PPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 P +++ ++ L + C ++Q+ TG + +Y P AF+SV +I +VN GW IR +H ASM LH+ R G F RE TW G +L + T + GY LP Q+ W Sbjct: 24 PSNISFWWNLGSLLGACLIIQITTGLFLAMHYTPDTQTAFSSVAHITRDVNHGWTIRYMHANGASMFFTCLFLHIGRGLYYGSFLS-RE-TWNIGTILLLTTMATAFMGYVLPWGQMSLW 141
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB_PROPA (Cytochrome b OS=Procellaria parkinsoni GN=MT-CYB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 38/133 (28.57%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 328 IQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYW 726 ++ I + + PP+++ ++ + C + Q+ TG + +Y T AF+SV + V +GWLIR++H AS + LH+ R + G + TW TGV+L + + GY LP Q+ +W Sbjct: 12 LKMINNSLIDLPTPPNISAWWNFGSLLGICLMTQILTGLLLAMHYTADTTLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLYKE--TWNTGVILLLTLMATAFVGYVLPWGQMSFW 142 The following BLAST results are available for this feature:
BLAST of CK936841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936841 ID=CK936841; Name=CK936841; organism=Citrus sinensis; type=EST; length=732bpback to top |