CK936841

Overview
NameCK936841
Unique NameCK936841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_LACSA (Cytochrome b6 OS=Lactuca sativa GN=petB PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.275e-78
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPRDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_HUPLU (Cytochrome b6 OS=Huperzia lucidula GN=petB PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.275e-78
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYS P DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSSPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_KLEBI (Cytochrome b6 OS=Klebsormidium bilatum GN=petB PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.971e-78
Identity = 137/148 (92.57%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADD+TSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQY+MT+VNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDVTSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYLMTDVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_ADICA (Cytochrome b6 OS=Adiantum capillus-veneris GN=petB PE=2 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 2.971e-78
Identity = 138/148 (93.24%), Postives = 144/148 (97.30%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQ+ATGFAMTFYYRPTVTEAF+SVQYIMTEVNFGWLIRSVHRWSASMMVL+ ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQIATGFAMTFYYRPTVTEAFSSVQYIMTEVNFGWLIRSVHRWSASMMVLVMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CUSRE (Cytochrome b6 OS=Cuscuta reflexa GN=petB PE=2 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 3.880e-78
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDW EERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASV+YIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWLEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVKYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_PSINU (Cytochrome b6 OS=Psilotum nudum GN=petB PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.618e-78
Identity = 137/148 (92.57%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAF+SVQYIMTEVNFGWL+RSVHRWSASMMVLM ILHVFRVYLTGGFK PRELTW+TGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEVNFGWLVRSVHRWSASMMVLMMILHVFRVYLTGGFKNPRELTWITGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_ZYGCR (Cytochrome b6 OS=Zygnema circumcarinatum GN=petB PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.474e-77
Identity = 136/148 (91.89%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQ+IADDITSKYVPPHVNIFYCL GITLTCF++QVATGFAMTFYYRPTVTEAFASVQYIMT+VNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+L VLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCLGGITLTCFIIQVATGFAMTFYYRPTVTEAFASVQYIMTDVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILGVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_SPIMX (Cytochrome b6 OS=Spirogyra maxima GN=petB PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + K+YDWFEERLEIQAIADDI SKYVPPHVNIFYCL GITLTCFL+QVATGFAMTFYYRPTV EAFASVQYIMT+VNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKIYDWFEERLEIQAIADDIISKYVPPHVNIFYCLGGITLTCFLIQVATGFAMTFYYRPTVAEAFASVQYIMTDVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_PINTH (Cytochrome b6 OS=Pinus thunbergii GN=petB PE=3 SV=2)

HSP 1 Score: 287.73 bits (735), Expect = 4.290e-77
Identity = 138/148 (93.24%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYD FEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQY+MTEVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDRFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYLMTEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_PINKO (Cytochrome b6 OS=Pinus koraiensis GN=petB PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.290e-77
Identity = 138/148 (93.24%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYD FEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQY+MTEVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDRFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYLMTEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAV 148
The following BLAST results are available for this feature:
BLAST of CK936841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYB6_LACSA2.275e-7894.59Cytochrome b6 OS=Lactuca sativa GN=petB PE=3 SV=1[more]
CYB6_HUPLU2.275e-7894.59Cytochrome b6 OS=Huperzia lucidula GN=petB PE=3 SV... [more]
CYB6_KLEBI2.971e-7892.57Cytochrome b6 OS=Klebsormidium bilatum GN=petB PE=... [more]
CYB6_ADICA2.971e-7893.24Cytochrome b6 OS=Adiantum capillus-veneris GN=petB... [more]
CYB6_CUSRE3.880e-7894.59Cytochrome b6 OS=Cuscuta reflexa GN=petB PE=2 SV=2[more]
CYB6_PSINU6.618e-7892.57Cytochrome b6 OS=Psilotum nudum GN=petB PE=3 SV=1[more]
CYB6_ZYGCR1.474e-7791.89Cytochrome b6 OS=Zygnema circumcarinatum GN=petB P... [more]
CYB6_SPIMX3.284e-7791.89Cytochrome b6 OS=Spirogyra maxima GN=petB PE=3 SV=... [more]
CYB6_PINTH4.290e-7793.24Cytochrome b6 OS=Pinus thunbergii GN=petB PE=3 SV=... [more]
CYB6_PINKO4.290e-7793.24Cytochrome b6 OS=Pinus koraiensis GN=petB PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_C12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936841 ID=CK936841; Name=CK936841; organism=Citrus sinensis; type=EST; length=732bp
AAATAACAAATCAAAGAAAATGAAATAGGTAAATAGAAGATTCAAGAGGC
CTGTAACGATCAACATAAAGATAAGCGCGTCGACTTGATTTTTTGGCATT
CTAATTATAACCACAAAGAAAAGCTTTCTTATTTTTATTCTTTCGTATTT
TTAGATAAGATTGAATCAAAAAATTAAGAAGTTTCCAATTTTCTATTCCA
TACCAGTATTGGGGTGGTTTTGTTTGAGCCGTACGAGATGAAATTCTCAT
ATACGGTTCTCAGAGGGGAGTTCTCTTGGTTTACCTATCTCAATAAAGTC
TACGATTGGTTCGAAGAACGTCTCGAGATTCAGGCGATTGCAGATGATAT
AACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTGNNNG
GAATTACGCTCACTTGTTTTTTAGTACAAGTAGCTACAGGGTTTGCTATG
ACTTTTTACTACCGCCCGACCGTTACTGAGGCTTTTGCCTCTGTTCAATA
CATAATGACGGAAGTTAACTTCGGGTGGTTAATTCGATCGGTTCATCGAT
GGTCGGCAAGTATGATGGTCCTAATGACAATCCTGCACGTATTTCGCGTG
TATCTCACCGGGGGTTTTAAAAAACCTCGCGAATTGACTTGGGTTACAGG
TGTGGTTCTGGCTGTATTGACCGCATCTTTTGGTGTAACAGGTTATTCTT
TACCTTGCGACCAAATTGGATATTGGGCAGTA
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