CK936841

Overview
NameCK936841
Unique NameCK936841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CYAPA (Cytochrome b6 OS=Cyanophora paradoxa GN=petB PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.290e-77
Identity = 135/148 (91.22%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWF+ERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMT+VNFGWLIRS HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWV GV+LAV+T SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MSKVYDWFQERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTDVNFGWLIRSTHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVVGVILAVITVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_THEEB (Cytochrome b6 OS=Thermosynechococcus elongatus (strain BP-1) GN=petB PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.317e-77
Identity = 134/148 (90.54%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            +NKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFL+Q ATGFAMTFYY+PTV EAFASVQYIM EVNFGWLIRS+H+WSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAV+T SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLIQFATGFAMTFYYKPTVAEAFASVQYIMNEVNFGWLIRSIHKWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVITVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_SYNEL (Cytochrome b6 OS=Synechococcus elongatus GN=petB PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.317e-77
Identity = 134/148 (90.54%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            +NKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFL+Q ATGFAMTFYY+PTV EAFASVQYIM EVNFGWLIRS+H+WSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAV+T SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLIQFATGFAMTFYYKPTVAEAFASVQYIMNEVNFGWLIRSIHKWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVITVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_OSTTA (Cytochrome b6 OS=Ostreococcus tauri GN=petB PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.317e-77
Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVY+WF ERLEIQ+IADD+TSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+L+V+T SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MSKVYNWFNERLEIQSIADDVTSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVILSVITVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_NEPOL (Cytochrome b6 OS=Nephroselmis olivacea GN=petB PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.317e-77
Identity = 132/148 (89.19%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++K+YDWFEERLEIQAIADDITSKYVPPHVNIFYC  GITLTCFL+QVATGFAMTFYYRPTVTEAFASV+YIMT VNFGWLIRS+HRWSASMMV+M ILHVFRVYLTGGFKKPRELTWVTGV+LAV+T SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MSKIYDWFEERLEIQAIADDITSKYVPPHVNIFYCFGGITLTCFLIQVATGFAMTFYYRPTVTEAFASVEYIMTNVNFGWLIRSIHRWSASMMVMMLILHVFRVYLTGGFKKPRELTWVTGVILAVITVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CUSGR (Cytochrome b6 OS=Cuscuta gronovii GN=petB PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.780e-76
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            +NKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCL GITLTCFLVQVATGFAMTFYYRP V EAFASVQYIM E NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV+L VLTASFGVTGYSLP DQ GYWA+
Sbjct:    4 VNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPIVNEAFASVQYIMIEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVLLGVLTASFGVTGYSLPWDQTGYWAI 151
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CHLRE (Cytochrome b6 OS=Chlamydomonas reinhardtii GN=petB PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.743e-76
Identity = 131/148 (88.51%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADDITSKYVPPHVNIFYC+ GIT TCFLVQVATGFAMTFYYRPTV EAFASVQYIMT+VNFGWLIRS+HRWSASMMVLM +LHVFRVYLTGGFK+PRELTWVTGV++AV T SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFLVQVATGFAMTFYYRPTVAEAFASVQYIMTDVNFGWLIRSIHRWSASMMVLMMVLHVFRVYLTGGFKRPRELTWVTGVIMAVCTVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_SCEOB (Cytochrome b6 OS=Scenedesmus obliquus GN=petB PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.380e-75
Identity = 132/148 (89.19%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQ+IADDITSKYVPPHVNIFYCL GIT TCFLVQVATGFAMTFYYRPTV EAFASVQYIMTEVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRE TW++GV++AV T SFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCLGGITFTCFLVQVATGFAMTFYYRPTVAEAFASVQYIMTEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRESTWISGVIMAVCTVSFGVTGYSLPWDQIGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_COLOB (Cytochrome b6 OS=Coleochaete orbicularis GN=petB PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.380e-75
Identity = 133/148 (89.86%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDI+SKYVPPHVNIFYCL GIT TCFL+QVA+GFAMTFYYRPTV EAFASVQYIMT+VNFGWLIRSVHRWSASMMVL  ILHVFRVYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDISSKYVPPHVNIFYCLGGITFTCFLLQVASGFAMTFYYRPTVAEAFASVQYIMTDVNFGWLIRSVHRWSASMMVLTMILHVFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQVGYWAV 148
[Close]
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CHAGL (Cytochrome b6 OS=Chaetosphaeridium globosum GN=petB PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.802e-75
Identity = 132/148 (89.19%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADDI+SKYVPPHVNIFYCL GIT T F++QVA+GFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLM ILH+FRVYLTGGFKKPRELTWVTGV+L+VLT SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDISSKYVPPHVNIFYCLGGITFTSFVIQVASGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHIFRVYLTGGFKKPRELTWVTGVILSVLTVSFGVTGYSLPWDQVGYWAV 148
The following BLAST results are available for this feature:
BLAST of CK936841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYB6_CYAPA4.290e-7791.22Cytochrome b6 OS=Cyanophora paradoxa GN=petB PE=3 ... [more]
CYB6_THEEB7.317e-7790.54Cytochrome b6 OS=Thermosynechococcus elongatus (st... [more]
CYB6_SYNEL7.317e-7790.54Cytochrome b6 OS=Synechococcus elongatus GN=petB P... [more]
CYB6_OSTTA7.317e-7790.54Cytochrome b6 OS=Ostreococcus tauri GN=petB PE=3 S... [more]
CYB6_NEPOL7.317e-7789.19Cytochrome b6 OS=Nephroselmis olivacea GN=petB PE=... [more]
CYB6_CUSGR2.780e-7691.89Cytochrome b6 OS=Cuscuta gronovii GN=petB PE=2 SV=... [more]
CYB6_CHLRE4.743e-7688.51Cytochrome b6 OS=Chlamydomonas reinhardtii GN=petB... [more]
CYB6_SCEOB1.380e-7589.19Cytochrome b6 OS=Scenedesmus obliquus GN=petB PE=3... [more]
CYB6_COLOB1.380e-7589.86Cytochrome b6 OS=Coleochaete orbicularis GN=petB P... [more]
CYB6_CHAGL1.802e-7589.19Cytochrome b6 OS=Chaetosphaeridium globosum GN=pet... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_C12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936841 ID=CK936841; Name=CK936841; organism=Citrus sinensis; type=EST; length=732bp
AAATAACAAATCAAAGAAAATGAAATAGGTAAATAGAAGATTCAAGAGGC
CTGTAACGATCAACATAAAGATAAGCGCGTCGACTTGATTTTTTGGCATT
CTAATTATAACCACAAAGAAAAGCTTTCTTATTTTTATTCTTTCGTATTT
TTAGATAAGATTGAATCAAAAAATTAAGAAGTTTCCAATTTTCTATTCCA
TACCAGTATTGGGGTGGTTTTGTTTGAGCCGTACGAGATGAAATTCTCAT
ATACGGTTCTCAGAGGGGAGTTCTCTTGGTTTACCTATCTCAATAAAGTC
TACGATTGGTTCGAAGAACGTCTCGAGATTCAGGCGATTGCAGATGATAT
AACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTGNNNG
GAATTACGCTCACTTGTTTTTTAGTACAAGTAGCTACAGGGTTTGCTATG
ACTTTTTACTACCGCCCGACCGTTACTGAGGCTTTTGCCTCTGTTCAATA
CATAATGACGGAAGTTAACTTCGGGTGGTTAATTCGATCGGTTCATCGAT
GGTCGGCAAGTATGATGGTCCTAATGACAATCCTGCACGTATTTCGCGTG
TATCTCACCGGGGGTTTTAAAAAACCTCGCGAATTGACTTGGGTTACAGG
TGTGGTTCTGGCTGTATTGACCGCATCTTTTGGTGTAACAGGTTATTCTT
TACCTTGCGACCAAATTGGATATTGGGCAGTA
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