CK936841

Overview
NameCK936841
Unique NameCK936841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_ACAM1 (Cytochrome b6 OS=Acaryochloris marina (strain MBIC 11017) GN=petB PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.802e-75
Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 1
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWFEERLEIQAIADD+T+KYVPPHVNIFYCL G+TL CF++Q ATGFAMTFYYRPTVTEAF S+QYIMTEVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTW+TGVVLAV+T +FGVTGYSLP DQ+GYWAV
Sbjct:    1 MSKVYDWFEERLEIQAIADDVTTKYVPPHVNIFYCLGGVTLVCFIIQFATGFAMTFYYRPTVTEAFNSIQYIMTEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWITGVVLAVITVTFGVTGYSLPWDQVGYWAV 148          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_STIHE (Cytochrome b6 OS=Stigeoclonium helveticum GN=petB PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.074e-75
Identity = 131/148 (88.51%), Postives = 140/148 (94.59%), Query Frame = 1
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++KVYDWF+ERLEIQAIADDI+SKYVPPHVNIFYCL GIT TCFLVQVATGFAMTFYYRPTV EAFASVQYIMTEVNFGWLIRS+HRWSASMMVLM ILHVFRV+LTGGFKKPRELTW TGV++AV T SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MSKVYDWFDERLEIQAIADDISSKYVPPHVNIFYCLGGITFTCFLVQVATGFAMTFYYRPTVVEAFASVQYIMTEVNFGWLIRSIHRWSASMMVLMMILHVFRVWLTGGFKKPRELTWTTGVIMAVCTVSFGVTGYSLPWDQVGYWAV 148          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CHLVU (Cytochrome b6 OS=Chlorella vulgaris GN=petB PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.015e-75
Identity = 132/148 (89.19%), Postives = 139/148 (93.92%), Query Frame = 1
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQ+IADDI+SKYVPPHVNIFYC+ GIT TCFLVQVATGFAMTFYYRPTV EAFASVQYIMTEVNFGWLIRS+HRWSASMMVLM ILHV RVYLTGGFKKPRELTWVTGV++AV T SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQSIADDISSKYVPPHVNIFYCIGGITFTCFLVQVATGFAMTFYYRPTVAEAFASVQYIMTEVNFGWLIRSIHRWSASMMVLMMILHVCRVYLTGGFKKPRELTWVTGVIMAVCTVSFGVTGYSLPWDQIGYWAV 148          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CYAP4 (Cytochrome b6 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=petB PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 8.944e-75
Identity = 129/147 (87.76%), Postives = 140/147 (95.24%), Query Frame = 1
Query:  292 NKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            +KVY WFEERLEIQA+ADD++SKYVPPHVNIFYCL GITLTCFL+Q ATGFAMTFYY+PTVTEAFASVQYIM +VNFGWLIRS+H+WSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAV+T SFGVTGYSLP DQ+GYWAV
Sbjct:    9 SKVYQWFEERLEIQALADDVSSKYVPPHVNIFYCLGGITLTCFLIQFATGFAMTFYYKPTVTEAFASVQYIMNDVNFGWLIRSIHKWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVITVSFGVTGYSLPWDQVGYWAV 155          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_GUITH (Cytochrome b6 OS=Guillardia theta GN=petB PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.168e-74
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = 1
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWA 729
            + KVYDWFEERLEIQAIADDITSKYVPPHVNIFYC+ GIT TCF++QVATGFAMTFYYRPTV EAFASV+YIMTEVN+GWL RS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGV LAV+T SFGVTGYSLP DQ+GYWA
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFIIQVATGFAMTFYYRPTVAEAFASVEYIMTEVNYGWLFRSMHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVTLAVVTVSFGVTGYSLPWDQVGYWA 147          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_STAPU (Cytochrome b6 OS=Staurastrum punctulatum GN=petB PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.526e-74
Identity = 129/148 (87.16%), Postives = 139/148 (93.92%), Query Frame = 1
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            + KVYDWFEERLEIQAIADD+T+KYVPPHVNIFYCL GI  T F++QVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWL+RSVHRWSASMMV+  ILH+FRVYLTGGFKKPRELTWVTGV+L+VLT SFGVTGYSLP DQIGYWAV
Sbjct:    1 MGKVYDWFEERLEIQAIADDVTNKYVPPHVNIFYCLGGIVFTSFIIQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLVRSVHRWSASMMVMTMILHIFRVYLTGGFKKPRELTWVTGVILSVLTVSFGVTGYSLPWDQIGYWAV 148          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_EUGGR (Cytochrome b6 OS=Euglena gracilis GN=petB PE=1 SV=3)

HSP 1 Score: 278.87 bits (712), Expect = 1.993e-74
Identity = 127/148 (85.81%), Postives = 140/148 (94.59%), Query Frame = 1
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            +++VYDWFEERLEIQAIADD++SKYVPPHVNIFYCL GIT TCF++QVATGFAMTFYYRPTVTEAF SV+YIM EVNFGWLIRS+HRWSASMMVLM ILHV RVYLTGGFKKPRELTWVTG++LA+LT SFGVTGYSLP DQ+GYWAV
Sbjct:    1 MSRVYDWFEERLEIQAIADDVSSKYVPPHVNIFYCLGGITFTCFIIQVATGFAMTFYYRPTVTEAFLSVKYIMNEVNFGWLIRSIHRWSASMMVLMMILHVCRVYLTGGFKKPRELTWVTGIILAILTVSFGVTGYSLPWDQVGYWAV 148          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_CHLPR (Cytochrome b6 OS=Chlorella protothecoides GN=petB PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.993e-74
Identity = 128/148 (86.49%), Postives = 139/148 (93.92%), Query Frame = 1
Query:  289 LNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            ++K+YDWFEERLEIQ+IADDI+SKYVPPHVNIFYC  GIT TCFLVQVATGFAMTFYYRPTV EAF SVQY+MT+VNFGWLIRS+HRWSASMMVLM ILH+FRVYLTGGFKKPRELTWVTGV++AV T SFGVTGYSLP DQIGYWAV
Sbjct:    1 MSKIYDWFEERLEIQSIADDISSKYVPPHVNIFYCFGGITFTCFLVQVATGFAMTFYYRPTVAEAFTSVQYLMTQVNFGWLIRSIHRWSASMMVLMMILHIFRVYLTGGFKKPRELTWVTGVLMAVCTVSFGVTGYSLPWDQIGYWAV 148          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_NOSP7 (Cytochrome b6 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=petB PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.798e-74
Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 1
Query:  298 VYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            VYDWFEERLEIQA+A+D+TSKYVPPHVNIFYCL GITL CFL+Q ATGFAMTFYYRPTVTEAF+SV+YIM EVNFGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTWV+GV+LAV+T SFGVTGYSLP DQ+GYWAV
Sbjct:    4 VYDWFEERLEIQALAEDVTSKYVPPHVNIFYCLGGITLVCFLIQFATGFAMTFYYRPTVTEAFSSVEYIMNEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVSGVILAVITVSFGVTGYSLPWDQVGYWAV 148          
BLAST of CK936841 vs. ExPASy Swiss-Prot
Match: CYB6_MASLA (Cytochrome b6 OS=Mastigocladus laminosus GN=petB PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.798e-74
Identity = 126/145 (86.90%), Postives = 139/145 (95.86%), Query Frame = 1
Query:  298 VYDWFEERLEIQAIADDITSKYVPPHVNIFYCLXGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPCDQIGYWAV 732
            VYDWF+ERLEIQA+ADD+TSKYVPPHVNIFYCL GITLTCFL+Q ATGFAMTFYY+PTVTEA+ASVQYIM EV+FGWLIRS+HRWSASMMVLM ILHVFRVYLTGGFKKPRELTW++GV+LAV+T SFGVTGYSLP DQ+GYWAV
Sbjct:    4 VYDWFQERLEIQALADDVTSKYVPPHVNIFYCLGGITLTCFLIQFATGFAMTFYYKPTVTEAYASVQYIMNEVSFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWISGVILAVITVSFGVTGYSLPWDQVGYWAV 148          
The following BLAST results are available for this feature:
BLAST of CK936841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYB6_ACAM11.802e-7586.49Cytochrome b6 OS=Acaryochloris marina (strain MBIC... [more]
CYB6_STIHE3.074e-7588.51Cytochrome b6 OS=Stigeoclonium helveticum GN=petB ... [more]
CYB6_CHLVU4.015e-7589.19Cytochrome b6 OS=Chlorella vulgaris GN=petB PE=3 S... [more]
CYB6_CYAP48.944e-7587.76Cytochrome b6 OS=Cyanothece sp. (strain PCC 7425 /... [more]
CYB6_GUITH1.168e-7487.76Cytochrome b6 OS=Guillardia theta GN=petB PE=3 SV=... [more]
CYB6_STAPU1.526e-7487.16Cytochrome b6 OS=Staurastrum punctulatum GN=petB P... [more]
CYB6_EUGGR1.993e-7485.81Cytochrome b6 OS=Euglena gracilis GN=petB PE=1 SV=... [more]
CYB6_CHLPR1.993e-7486.49Cytochrome b6 OS=Chlorella protothecoides GN=petB ... [more]
CYB6_NOSP75.798e-7487.59Cytochrome b6 OS=Nostoc punctiforme (strain ATCC 2... [more]
CYB6_MASLA5.798e-7486.90Cytochrome b6 OS=Mastigocladus laminosus GN=petB P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_C12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936841 ID=CK936841; Name=CK936841; organism=Citrus sinensis; type=EST; length=732bp
AAATAACAAATCAAAGAAAATGAAATAGGTAAATAGAAGATTCAAGAGGC
CTGTAACGATCAACATAAAGATAAGCGCGTCGACTTGATTTTTTGGCATT
CTAATTATAACCACAAAGAAAAGCTTTCTTATTTTTATTCTTTCGTATTT
TTAGATAAGATTGAATCAAAAAATTAAGAAGTTTCCAATTTTCTATTCCA
TACCAGTATTGGGGTGGTTTTGTTTGAGCCGTACGAGATGAAATTCTCAT
ATACGGTTCTCAGAGGGGAGTTCTCTTGGTTTACCTATCTCAATAAAGTC
TACGATTGGTTCGAAGAACGTCTCGAGATTCAGGCGATTGCAGATGATAT
AACTAGTAAATACGTTCCTCCTCATGTCAACATATTTTATTGTCTGNNNG
GAATTACGCTCACTTGTTTTTTAGTACAAGTAGCTACAGGGTTTGCTATG
ACTTTTTACTACCGCCCGACCGTTACTGAGGCTTTTGCCTCTGTTCAATA
CATAATGACGGAAGTTAACTTCGGGTGGTTAATTCGATCGGTTCATCGAT
GGTCGGCAAGTATGATGGTCCTAATGACAATCCTGCACGTATTTCGCGTG
TATCTCACCGGGGGTTTTAAAAAACCTCGCGAATTGACTTGGGTTACAGG
TGTGGTTCTGGCTGTATTGACCGCATCTTTTGGTGTAACAGGTTATTCTT
TACCTTGCGACCAAATTGGATATTGGGCAGTA
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