CK936838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.373e-17 Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAEL 110 HSP 2 Score: 30.8018 bits (68), Expect = 7.373e-17 Identity = 22/79 (27.85%), Postives = 36/79 (45.57%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 595 +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 113 LLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.246e-16 Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAEL 110 HSP 2 Score: 30.8018 bits (68), Expect = 1.246e-16 Identity = 22/79 (27.85%), Postives = 36/79 (45.57%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 595 +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 113 LLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16 Identity = 38/108 (35.19%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 78 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELH 389 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++VD+ D++++ +++ELH Sbjct: 5 FNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELH 112
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.557e-16 Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LWR YF G++++VD D +R+ E++ EL Sbjct: 19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAEL 110 HSP 2 Score: 27.7202 bits (60), Expect = 3.557e-16 Identity = 21/80 (26.25%), Postives = 33/80 (41.25%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 595 +L +EL L+ NK D P A++ E+ LGL+ +R ++ S G G EG WL+ + Sbjct: 113 LLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLRQGYG--EGFKWLAQYV 190
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.621e-16 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 3 Query: 108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 +K+ +IL +GLD AGKTT+L+ LK +V PT E + NI F +D+GG R +WR Y+ ++++VD+NDR+R EA+ EL Sbjct: 18 QKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKEL 110 HSP 2 Score: 26.9498 bits (58), Expect = 4.621e-16 Identity = 12/36 (33.33%), Postives = 21/36 (58.33%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 499 +L+++ L + L+ NK D+P A + E+ LGL Sbjct: 113 LLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGL 148
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.623e-16 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + T PT E + +I FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL Sbjct: 22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVEL 113 HSP 2 Score: 27.335 bits (59), Expect = 4.623e-16 Identity = 19/70 (27.14%), Postives = 28/70 (40.00%), Query Frame = 2 Query: 407 ELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 595 EL+ ++ NK D P+A++ E+ LGL + QR + G E WLS I Sbjct: 121 ELKTVPFVILGNKIDAPSAVSETELRAALGLLNTTGDARIEGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.811e-16 Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + T PT E + NI FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL Sbjct: 22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIEL 113 HSP 2 Score: 25.409 bits (54), Expect = 7.811e-16 Identity = 20/70 (28.57%), Postives = 27/70 (38.57%), Query Frame = 2 Query: 407 ELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 595 EL + V NK D P+A++ E+ LGL + QR + G E WLS I Sbjct: 121 ELDNVPFAVLGNKIDSPSAVSETELRAALGLMNTTGYTKIEGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.016e-15 Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D + E++ EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAEL 110 HSP 2 Score: 30.0314 bits (66), Expect = 1.016e-15 Identity = 21/79 (26.58%), Postives = 36/79 (45.57%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 595 +L +EL L+ NK D P+A++ ++ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 113 LLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + T PT+ E + N+ FT +D+GG + R LWR YF G++F+VDS D +R E++ EL Sbjct: 19 KSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAEL 110
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D DR EA+ EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAEL 110 The following BLAST results are available for this feature:
BLAST of CK936838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936838 ID=CK936838; Name=CK936838; organism=Citrus sinensis; type=EST; length=720bpback to top |