CK936838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LWR YF G++F+VD+ D +R+ E++ EL Sbjct: 15 KHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAEL 106
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D +R+ EA+ E+ Sbjct: 19 KHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEI 110
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 36/92 (39.13%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R+ E++ EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAEL 110
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.060e-14 Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKEL 110 HSP 2 Score: 27.335 bits (59), Expect = 3.060e-14 Identity = 22/82 (26.83%), Postives = 34/82 (41.46%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL--------------HSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 595 +L+++ L L+ NK D+P A + E+ LGL ++R ++ S G G EG WLS I Sbjct: 113 LLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYG--EGFKWLSQYI 192
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 K ++L +GLD AGKTT+L+ LK + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAEL 110
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14 Identity = 40/105 (38.10%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 72 LSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 LSF L++ K +IL +GLD AGKTT+L LK G + + +PT E + NI F +D+GG + R LW+ Y+ + +++++DS+ +DR VE++ EL Sbjct: 11 LSFLGLYN-----KNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKEL 110
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.166e-14 Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKEL 110 HSP 2 Score: 26.5646 bits (57), Expect = 5.166e-14 Identity = 12/36 (33.33%), Postives = 20/36 (55.56%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 499 +L+++ L L+ NK D+P A + E+ LGL Sbjct: 113 LLSDESLASVPFLILGNKIDIPYAASEDELRYHLGL 148
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.712e-14 Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKREL 110 HSP 2 Score: 26.5646 bits (57), Expect = 6.712e-14 Identity = 22/82 (26.83%), Postives = 33/82 (40.24%), Query Frame = 2 Query: 392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL--------------HSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 595 +L+++ L L+ NK D+P A + E+ LGL +R ++ S G G EG WLS I Sbjct: 113 LLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYG--EGFKWLSQYI 192
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.460e-13 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 3 Query: 111 KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 392 ++ +L++GLD AGK+T L L + IPT GFN + K+ + ++GG +R W+ + L+FVVDS DR R+ AR ELH+ Sbjct: 76 EQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHK 170 HSP 2 Score: 31.187 bits (69), Expect = 1.460e-13 Identity = 15/35 (42.86%), Postives = 23/35 (65.71%), Query Frame = 2 Query: 404 DELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 508 D+ D ++V ANKQDL AM+ E+ +LGL ++ Sbjct: 173 DKDPDLPVVVVANKQDLSEAMSMGELQRELGLQAI 207
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL3_YEAST (ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae GN=ARL3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 87 LFSRLFAKKEMRILMVGLDAAGKTTIL------YKLKLGEIVTTIPTIGFNVET--VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386 L++ K++ IL++GLD AGKTT L Y L + PT+G NV T V+ K I WDVGGQ+ +R +W Y+ G+IF+VDS+DR+R+ E L Sbjct: 8 LYNNWNKKEQYSILILGLDNAGKTTFLETLKKEYSLAFKALEKIQPTVGQNVATIPVDSKQI-LKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTL 114 The following BLAST results are available for this feature:
BLAST of CK936838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936838 ID=CK936838; Name=CK936838; organism=Citrus sinensis; type=EST; length=720bpback to top |