CK936838

Overview
NameCK936838
Unique NameCK936838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.178e-38
Identity = 48/93 (51.61%), Postives = 69/93 (74.19%), Query Frame = 3 
Query:  108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            ++E+R+LM+GLD AGKTTIL K    +I T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106

HSP 2 Score: 71.633 bits (174), Expect = 2.178e-38
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2 
Query:  392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            +L E+ L  A LL+FANKQDLP A+++  I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:  109 LLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 107.071 bits (266), Expect = 2.838e-38
Identity = 48/93 (51.61%), Postives = 69/93 (74.19%), Query Frame = 3 
Query:  108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            ++E+R+LM+GLD AGKTTIL K    +I T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106

HSP 2 Score: 71.2478 bits (173), Expect = 2.838e-38
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2 
Query:  392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            +L E+ L  A LL+FANKQDLP A+++  I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:  109 LLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 4.816e-38
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 3 
Query:  108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            ++E+R+LM+GLD AGKTTIL K    ++ T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106

HSP 2 Score: 70.8626 bits (172), Expect = 4.816e-38
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 2 
Query:  392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            +L E+ L  A LL+FANKQDLP A++   I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:  109 LLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.387e-37
Identity = 46/93 (49.46%), Postives = 69/93 (74.19%), Query Frame = 3 
Query:  108 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            ++++R+LM+GLD AGKTTIL K    ++ T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL
Sbjct:   14 ERDVRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQREL 106

HSP 2 Score: 70.8626 bits (172), Expect = 1.387e-37
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 2 
Query:  392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            +L E+ L  A LL+FANKQDLP A++   I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:  109 LLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.388e-37
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 3 
Query:  111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQEL 107

HSP 2 Score: 74.7146 bits (182), Expect = 1.388e-37
Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  386 APMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            A +L+E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A SGEG+ +G++W+  N++ K
Sbjct:  108 AELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALSGEGVQDGMNWVCKNVSTK 180
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.784e-37
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 3 
Query:  111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQEL 107

HSP 2 Score: 72.4034 bits (176), Expect = 6.784e-37
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  386 APMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            A +L E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N++ K
Sbjct:  108 AELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRFWQIQSCSALTGEGVQDGMNWVCKNVSAK 180
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.954e-36
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 3 
Query:  111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQEL 107

HSP 2 Score: 70.4774 bits (171), Expect = 1.954e-36
Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  386 APMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            A +L+E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +G+G+ +G++W+  N+  K
Sbjct:  108 AELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMNWVCKNVNAK 180
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.545e-36
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 3 
Query:  111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQEL 107

HSP 2 Score: 70.4774 bits (171), Expect = 2.545e-36
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  386 APMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            A +L E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:  108 AELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 3.316e-36
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 3 
Query:  111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR YF+NT  LI+V+DS DR R  E   EL
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQEL 107

HSP 2 Score: 70.8626 bits (172), Expect = 3.316e-36
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 2 
Query:  392 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            +L E++L    +LVFANKQDL  A  AAEI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:  110 LLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180
[Close]
BLAST of CK936838 vs. ExPASy Swiss-Prot
Match: ARL3_DANRE (ADP-ribosylation factor-like protein 3 OS=Danio rerio GN=arl3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.319e-36
Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 3 
Query:  111 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDEL 386
            +E+RIL++GLD  GKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL
Sbjct:   16 QEVRILLLGLDNGGKTTLLKQLASEDITHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQEL 107

HSP 2 Score: 70.0922 bits (170), Expect = 4.319e-36
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 2 
Query:  386 APMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 604
            A +L+E++L    +LVFANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  ++  K
Sbjct:  108 AELLDEEKLSGVPVLVFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKSVNAK 180
The following BLAST results are available for this feature:
BLAST of CK936838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARL2_BOVIN2.178e-3851.61ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL2_HUMAN2.838e-3851.61ADP-ribosylation factor-like protein 2 OS=Homo sap... [more]
ARL2_MOUSE4.816e-3850.54ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARL2_RAT1.387e-3749.46ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]
ARL3_TAEGU1.388e-3752.17ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]
ARL3_BOVIN6.784e-3752.17ADP-ribosylation factor-like protein 3 OS=Bos taur... [more]
ARL3_XENLA1.954e-3652.17ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARL3_PIG2.545e-3652.17ADP-ribosylation factor-like protein 3 OS=Sus scro... [more]
ARL3_RAT3.316e-3652.17ADP-ribosylation factor-like protein 3 OS=Rattus n... [more]
ARL3_DANRE4.319e-3651.09ADP-ribosylation factor-like protein 3 OS=Danio re... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_E05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936838 ID=CK936838; Name=CK936838; organism=Citrus sinensis; type=EST; length=720bp
GGGGACCATTCTCCTCGTTTTCTCTCAAGCAGCCTCCTCCTTCAGATCTC
GTGAGATAACAGAAAATGGGGCTGTCATTTACGAAACTTTTTAGCCGGCT
TTTTGCCAAGAAAGAGATGCGAATTCTGATGGTGGGTCTCGACGCTGCTG
GTAAGACCACCATTTTGTACAAGCTCAAGCTCGGTGAGATTGTGACAACC
ATTCCTACCATTGGTTTCAACGTGGAGACTGTGGAATATAAGAACATTAG
CTTCACTGTTTGGGATGTTGGGGGTCAGGATAAGATTCGTCCTTTGTGGA
GACATTACTTCCAAAACACTCAAGGACTTATCTTTGTGGTTGATAGCAAT
GATCGTGACCGTGTGGTTGAAGCTAGAGATGAACTGCACCGATGCTGAAT
GAGGATGAGTTGAGGGATGCTGTGCTGCTTGTTTTTGCCAACAAGCAAGA
TCTTCCAAATGCCATGAATGCTGCAGAGATCACTGATAAGCTTGGTCTTC
ACTCACTTCGCCAACGCCACTGGTACATCCAGAGCACATGTGCAACATCT
GGGGAAGGACTCTATGAGGGTCTGGACTGGCTCTCCAACAACATCGCTAA
CAAGGCTTAAGTGATTGGTCAAGTCTGAGCGACTCTTTGCGGCAGCATCT
ATGTGAATGATGTTACTATGCTTTTGTTTATTTTGTCGGGGATTCTTTTT
GGGCTTTACTACCTACGTTN
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