CK936830

Overview
NameCK936830
Unique NameCK936830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.986e-56
Identity = 121/201 (60.20%), Postives = 147/201 (73.13%), Query Frame = 1
Query:  127 TDPGHLQDVCVA-INDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 720
            +DP  LQD CVA +N P   V VNG  CK+P  A A+DFF +  L KP +T N++G + T  NV Q+PGLNTLGIS  R+D+AP G  PPH HPRA+EIF VLEGTLYVGFVTS+  +N L++KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+NP I+ D L KAFQ+D KI+  LQ +F
Sbjct:   25 SDPSPLQDFCVADLNSP---VRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.986e-56
Identity = 113/197 (57.36%), Postives = 137/197 (69.54%), Query Frame = 1
Query:  130 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 720
            DP  LQD CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL  PGNT  RLG     AN   IPGLNTLG+   RID+AP G  PPH HPRASEI LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+ F  NIGKTNA A  A+ SQ PG +++ + VFG+ P I+P  L KAF LD  IV+ L+  F
Sbjct:   26 DPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.033e-55
Identity = 111/197 (56.35%), Postives = 134/197 (68.02%), Query Frame = 1
Query:  130 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 720
            DP  LQD CVA N+  +GV+VNG+FCKDPK     DF+ SGL  PGNT    G   T  +VE++PGLNTLG+   R D+AP G  PPH HPR S+IFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLIHF  NIG+TNA   SA  SQ PG + I + VFG+ P I+P  L KAF LD   VK LQ  F
Sbjct:   26 DPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAFALDYNKVKYLQAVF 221          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.467e-55
Identity = 112/201 (55.72%), Postives = 131/201 (65.17%), Query Frame = 1
Query:  127 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGK-AFQLDPKIVKDLQNKF 720
            TDP  LQD CV +N P DG+FVNG FCKDP     +DF + GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AKVLNKGDVFVFPQGLIHFQ NIG       S L+SQ PG +TIAN VFG      P+ L +  F L P I   + + F
Sbjct:   23 TDPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG------PEHLSQLMFLLRPSISMRIWSSF 217          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.935e-54
Identity = 116/203 (57.14%), Postives = 137/203 (67.49%), Query Frame = 1
Query:  127 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 732
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ D L KAFQ++   +  LQ +F   N
Sbjct:   24 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQVEKGTIDWLQAQFWENN 223          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.485e-53
Identity = 118/197 (59.90%), Postives = 141/197 (71.57%), Query Frame = 1
Query:  130 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQ 711
            +P  LQD CVA  D    V VNG  CK+P    A+DFF +  L KP +TA N++G + T  NV +IPGLNTLGIS  R+DYAP G  PPH HPRA+EIF VLEGTLYVGFVTS+  +N L +KVLNKGDVFVFP+GLIHFQFN+     A A SA++SQ PG +TIAN VF +NP I+ D L KAFQ+D KI+  LQ
Sbjct:   25 EPSPLQDFCVA--DLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAFQVDKKIIDLLQ 218          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.245e-53
Identity = 115/203 (56.65%), Postives = 136/203 (67.00%), Query Frame = 1
Query:  127 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 732
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+   L KAFQ++   +  LQ +F   N
Sbjct:   23 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAKAFQVEKGTIDWLQAQFWENN 222          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 4.238e-53
Identity = 115/201 (57.21%), Postives = 130/201 (64.68%), Query Frame = 1
Query:  127 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFY-SGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQL--NNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 720
            +DP  LQD CVA  D    VFVNG  CK+PK   A DFF    LG PGNT N  G   T   V ++PGLNTLGIS  RID+AP GQ PPH HPRA+EI  VL+GTL VGFVTS+Q    N    K+L  GDVFVFPQGLIHFQ N G   A A +AL+SQ PG +TIAN VFG+ P I  D L KAF +D   V  +Q KF
Sbjct:   28 SDPSQLQDFCVA--DKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.535e-53
Identity = 115/203 (56.65%), Postives = 136/203 (67.00%), Query Frame = 1
Query:  127 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 732
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+   L KAFQ++   +  LQ +F   N
Sbjct:   23 SDPSPLQDFCVA--DMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDIVLAKAFQVEKGTIDWLQAQFWENN 222          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.233e-52
Identity = 115/203 (56.65%), Postives = 135/203 (66.50%), Query Frame = 1
Query:  127 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 732
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVL KGDVFVFP GLIHFQFN      A A +AL+SQ PG +TIAN VFG+ P I+ + L KAFQ++   +  LQ +F   N
Sbjct:   24 SDPSPLQDFCVA--DEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQFWENN 223          
The following BLAST results are available for this feature:
BLAST of CK936830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL82_ORYSJ6.986e-5660.20Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL13_ARATH6.986e-5657.36Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL14_ARATH2.033e-5556.35Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GLP1_MESCR3.467e-5555.72Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL87_ORYSJ2.935e-5457.14Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL81_ORYSJ2.485e-5359.90Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL88_ORYSJ3.245e-5356.65Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL41_ORYSJ4.238e-5357.21Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ5.535e-5356.65Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL86_ORYSJ1.233e-5256.65Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_D08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936830 ID=CK936830; Name=CK936830; organism=Citrus sinensis; type=EST; length=852bp
GGGGAAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGA
CTCAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGG
CTTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGAT
GTCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAA
GTTCTGTAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTACTCAG
GGCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACA
GATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGC
ATTCCGCATTGACTATGCACCATATGGCCAAAGGCCACCTCACTTTCACC
CCCGTGCCAGTGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGT
TTTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAA
TAAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCA
ACATTGGAAAAACAAATGCAGCTGCTTATTCTGCTCTAAACAGCCAATTC
CCGGGTGAAGTTACCATAGCCAACACAGTCTTTGGAGCCAATCCTTCAAT
CAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGATCCAAAGATAGTGA
AAGATCTTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATG
AGCTTTAATATAAATGGCCTCTTCACTAATGGCTTTATTACTTTATCTCC
AGATTATCATATCTTAATTAATGTAATAAAAGAGGTCTCTCATGAACCTC
TC
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