CK936830

Overview
NameCK936830
Unique NameCK936830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.899e-27
Identity = 70/175 (40.00%), Postives = 90/175 (51.43%), Query Frame = 1
Query:  127 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSI 651
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE+  V  G++  GF  +      L  K L +GDVF+FP+GL+HF  N G   A  +S LNSQ PG V I + +F  +  +
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEV 194          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.382e-26
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:  130 DPGHLQDVCVAINDPKD--GVF-VNGKFCKDPKLARAEDFFYSGLGKPGNTANRL-GVDET-DANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQ 711
            DP  L D CVA        G F +NG  C DP LARA+ F  S L +  N A  L G + T  +    +PG N  G++  RID AP G  PPH HPRASE  LVL G++ VGF  +   +  L  ++L  G+ FVFP+ ++HF +N+     A   S LNSQ PG   +  + F   P +  + L KAF++  + V+ +Q
Sbjct:   23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDVQRIQ 219          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.377e-25
Identity = 69/162 (42.59%), Postives = 94/162 (58.02%), Query Frame = 1
Query:  229 AEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQN 714
            A DF Y GL   GNT+N +    T A V Q PG+N LGISA R+D A  G  P H HP ASE+  V +GT+  GF+TS   +NT+  + L  GD+ VFPQGL+H+Q+N G++ A A  A +   PG + I +    AN ++    + K   LD   VK L++
Sbjct:   50 AGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPG-LQITDYALFAN-NLPSAIVEKVTFLDDAQVKKLKS 207          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.051e-24
Identity = 69/155 (44.52%), Postives = 84/155 (54.19%), Query Frame = 1
Query:  142 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPG 606
            + D CVA N P      +G  CK+     A DF YSGL KPGNT N +    T A V Q PG+  LG++  R+D AP G  P H HP ASEI  V+EGT+   F++S    N +  K L  GDV VFPQGL+ FQ   GK  A     L  + PG
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGDVMVFPQGLLDFQEITGKI-APGLCELRQRNPG 173          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21
Identity = 64/161 (39.75%), Postives = 91/161 (56.52%), Query Frame = 1
Query:  235 DFF-YSGLGKPGNTANRLGVDE---TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLD-PKIVK 702
            DFF ++G  K  NT++    +    T A + + P LN   +S   + + P    PPH HPR++E+ LV++G L VGF+ +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S  PG V +  TVFG    I+   L K+F+ D P I+K
Sbjct:   48 DFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFKTDVPTILK 203          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 1
Query:  298 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQ 711
            T A + + P LN   +S   + Y P    PPH HPR++E+ L+++G L VGFV +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S   G V++  TVFG N  I+   L K+F+ D   ++ L+
Sbjct:   73 TKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFKTDVPTIQKLK 205          
BLAST of CK936830 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.427e-18
Identity = 58/168 (34.52%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  211 DPKLARAEDFFYSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHFHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIANTVFGANPSINPDFLGKAFQLDPKIVKDLQ 711
            DP       F Y  L   GN+ +   +  T A   + P L    +S   + +      PPH HPRASE+ +V++G L VG V + + N T+  + L  GD+FVFP+G++HFQFN G    A A+SA  S  PG +++   +FG+   I+   L K+   D   V  L+
Sbjct:   41 DPSGIDGAFFTYKNL-VTGNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGS--GIDDTILDKSMHTDQATVDQLK 204          
The following BLAST results are available for this feature:
BLAST of CK936830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL111_ORYSJ8.899e-2740.00Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL31_ORYSJ3.382e-2639.00Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL814_ORYSJ6.377e-2542.59Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GLP1_IPONI7.051e-2444.52Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL92_ORYSJ1.920e-2139.75Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL93_ORYSJ1.245e-2040.58Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL91_ORYSJ4.427e-1834.52Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004517_D08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936830 ID=CK936830; Name=CK936830; organism=Citrus sinensis; type=EST; length=852bp
GGGGAAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGA
CTCAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGG
CTTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGAT
GTCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAA
GTTCTGTAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTACTCAG
GGCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACA
GATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGC
ATTCCGCATTGACTATGCACCATATGGCCAAAGGCCACCTCACTTTCACC
CCCGTGCCAGTGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGT
TTTGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAA
TAAGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCA
ACATTGGAAAAACAAATGCAGCTGCTTATTCTGCTCTAAACAGCCAATTC
CCGGGTGAAGTTACCATAGCCAACACAGTCTTTGGAGCCAATCCTTCAAT
CAATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGATCCAAAGATAGTGA
AAGATCTTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATG
AGCTTTAATATAAATGGCCTCTTCACTAATGGCTTTATTACTTTATCTCC
AGATTATCATATCTTAATTAATGTAATAAAAGAGGTCTCTCATGAACCTC
TC
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