CK936829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_EUCGG (Photosystem I assembly protein ycf3 OS=Eucalyptus globulus subsp. globulus GN=ycf3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.172e-16 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_CHLSC (Photosystem I assembly protein ycf3 OS=Chloranthus spicatus GN=ycf3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.172e-16 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_TOBAC (Photosystem I assembly protein ycf3 OS=Nicotiana tabacum GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.531e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKTFSIVANILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_NICTO (Photosystem I assembly protein ycf3 OS=Nicotiana tomentosiformis GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.531e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKTFSIVANILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_NICSY (Photosystem I assembly protein ycf3 OS=Nicotiana sylvestris GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.531e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKTFSIVANILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_DAUCA (Photosystem I assembly protein ycf3 OS=Daucus carota GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.531e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKTFSI+ANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_PELHO (Photosystem I assembly protein ycf3 OS=Pelargonium hortorum GN=ycf3 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.611e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKTFSIVANILLRIIPTT GE+EAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEREAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_PIPCE (Photosystem I assembly protein ycf3 OS=Piper cenocladum GN=ycf3 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.410e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+INGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSQINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_ORYSJ (Photosystem I assembly protein ycf3 OS=Oryza sativa subsp. japonica GN=ycf3 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.410e-16 Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 233 MPRSRINGNFIDKTFSIVANILLRIIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGML 44
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_ORYSI (Photosystem I assembly protein ycf3 OS=Oryza sativa subsp. indica GN=ycf3 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.410e-16 Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 233 MPRSRINGNFIDKTFSIVANILLRIIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGML 44 The following BLAST results are available for this feature:
BLAST of CK936829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936829 ID=CK936829; Name=CK936829; organism=Citrus sinensis; type=EST; length=321bpback to top |