CK936829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_SACHY (Photosystem I assembly protein ycf3 OS=Saccharum hybrid GN=ycf3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 233 MPRSRINGNFIDKTFSIVANILL+IIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKRAFTYYRDGML 44
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_PLAOC (Photosystem I assembly protein ycf3 OS=Platanus occidentalis GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_NYMAL (Photosystem I assembly protein ycf3 OS=Nymphaea alba GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_NUPAD (Photosystem I assembly protein ycf3 OS=Nuphar advena GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_MAIZE (Photosystem I assembly protein ycf3 OS=Zea mays GN=ycf3 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 233 MPRSRINGNFIDKTFSIVANILL+IIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKRAFTYYRDGML 44
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_LIRTU (Photosystem I assembly protein ycf3 OS=Liriodendron tulipifera GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_HELAN (Photosystem I assembly protein ycf3 OS=Helianthus annuus GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 M RSRINGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MSRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_DRIGR (Photosystem I assembly protein ycf3 OS=Drimys granadensis GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_DIOEL (Photosystem I assembly protein ycf3 OS=Dioscorea elephantipes GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 233 MPRS+INGNFIDKT SIVANILLRIIPTT GEK+AFTYYRDGAI Sbjct: 1 MPRSQINGNFIDKTSSIVANILLRIIPTTSGEKKAFTYYRDGAI 44
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_CUSRE (Photosystem I assembly protein ycf3 OS=Cuscuta reflexa GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.922e-16 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRD 224 MPRSRINGNF+DKTFSIVANILLRIIPTT GEKEAFTYYRD Sbjct: 1 MPRSRINGNFLDKTFSIVANILLRIIPTTSGEKEAFTYYRD 41 The following BLAST results are available for this feature:
BLAST of CK936829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936829 ID=CK936829; Name=CK936829; organism=Citrus sinensis; type=EST; length=321bpback to top |