CK936829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_CHLAT (Photosystem I assembly protein ycf3 OS=Chlorokybus atmophyticus GN=ycf3 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.529e-11 Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+ N NFIDKTF++VA+ILL+I+PTT EKEAF YYRDG Sbjct: 1 MPRSQRNDNFIDKTFTVVADILLKILPTTGREKEAFAYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_MESVI (Photosystem I assembly protein ycf3 OS=Mesostigma viride GN=ycf3 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.303e-11 Identity = 29/42 (69.05%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+ N NFIDKTF++VA+I+L+++PTTV EK AF+YYRDG Sbjct: 1 MPRSQKNDNFIDKTFTVVADIILKVLPTTVREKAAFSYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_HUPLU (Photosystem I assembly protein ycf3 OS=Huperzia lucidula GN=ycf3 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.314e-11 Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+ N NFIDKTF++VA+ L++IPTT GEK+AFTYYRDG Sbjct: 1 MPRSQRNDNFIDKTFTLVADTSLQVIPTTQGEKKAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_SCEOB (Photosystem I assembly protein ycf3 OS=Scenedesmus obliquus GN=ycf3 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.634e-11 Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+ N NFIDKTF+++A+ILL+++PT+ EK+AFTYYRDG Sbjct: 1 MPRSQRNDNFIDKTFTVIADILLKVLPTSQREKQAFTYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_CUSOB (Photosystem I assembly protein ycf3 OS=Cuscuta obtusiflora GN=ycf3 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.634e-11 Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MP S+ N NFID+TFSI+ANILLRIIPTT GEKEAF YY +G Sbjct: 1 MPISQKNQNFIDRTFSIIANILLRIIPTTSGEKEAFAYYING 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_CUSGR (Photosystem I assembly protein ycf3 OS=Cuscuta gronovii GN=ycf3 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.634e-11 Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MP S+ N NFID+TFSI+ANILLRIIPTT GEKEAF YY +G Sbjct: 1 MPISQKNQNFIDRTFSIIANILLRIIPTTSGEKEAFAYYING 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_BIGNA (Photosystem I assembly protein ycf3 OS=Bigelowiella natans GN=ycf3 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.634e-11 Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+ N NFIDKTF++VA+ILL+++PT++ EK AFTYYR+G Sbjct: 1 MPRSQKNDNFIDKTFTVVADILLKVLPTSIDEKRAFTYYRNG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_ADICA (Photosystem I assembly protein ycf3 OS=Adiantum capillus-veneris GN=ycf3 PE=2 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.358e-11 Identity = 30/42 (71.43%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+ N NFIDKTF+I+A+IL+RI+PTT E+EAF YYRDG Sbjct: 1 MPRSQRNDNFIDKTFTILADILIRILPTTKREREAFIYYRDG 42
BLAST of CK936829 vs. ExPASy Swiss-Prot
Match: YCF3_PSEAK (Photosystem I assembly protein ycf3 OS=Pseudendoclonium akinetum GN=ycf3 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.610e-11 Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 102 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 227 MPRS+ N NFIDKTF++VA+IL++++PT+ EK+AFTYYRDG Sbjct: 1 MPRSQKNDNFIDKTFTVVADILIKVLPTSNREKQAFTYYRDG 42 The following BLAST results are available for this feature:
BLAST of CK936829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936829 ID=CK936829; Name=CK936829; organism=Citrus sinensis; type=EST; length=321bpback to top |