CX675189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_CAPHI (40S ribosomal protein S18 OS=Capra hircus GN=RPS18 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.357e-52 Identity = 93/132 (70.45%), Postives = 116/132 (87.88%), Query Frame = 2 Query: 71 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 V E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERLKKIR HRGLRH+WGLRVRGQH Sbjct: 4 VIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_CANFA (40S ribosomal protein S18 OS=Canis familiaris GN=RPS18 PE=1 SV=3) HSP 1 Score: 205.297 bits (521), Expect = 2.357e-52 Identity = 93/132 (70.45%), Postives = 116/132 (87.88%), Query Frame = 2 Query: 71 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 V E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERLKKIR HRGLRH+WGLRVRGQH Sbjct: 4 VIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_BOVIN (40S ribosomal protein S18 OS=Bos taurus GN=RPS18 PE=2 SV=3) HSP 1 Score: 205.297 bits (521), Expect = 2.357e-52 Identity = 93/132 (70.45%), Postives = 116/132 (87.88%), Query Frame = 2 Query: 71 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 V E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERLKKIR HRGLRH+WGLRVRGQH Sbjct: 4 VIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_SPOFR (40S ribosomal protein S18 OS=Spodoptera frugiperda GN=RpS18 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.859e-52 Identity = 90/132 (68.18%), Postives = 116/132 (87.88%), Query Frame = 2 Query: 71 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 V + FQHILR++NTN+DGK+K+MFA+T+IKG+GRR +NIV KKAD+D++KRAGE + E++ ++ +++NPRQ+KIPDWFLNRQKD DGKYSQ+ S+ LD KLR+DLERLKKIR HRG+RHYWGLRVRGQH Sbjct: 4 VIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 135
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_DROME (40S ribosomal protein S18 OS=Drosophila melanogaster GN=RpS18 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.385e-50 Identity = 89/132 (67.42%), Postives = 112/132 (84.85%), Query Frame = 2 Query: 71 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 V E FQHILR++NTN+DGK+K+ A+T+IKG+GRR +NIV KKADVD+ KRAGE + E+D ++ +++NP Q+K+P+WFLNRQKD DGKY Q+ S+ LD KLRDDLERLKKIR+HRGLRHYWGLRVRGQH Sbjct: 4 VIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_SCHPO (40S ribosomal protein S18 OS=Schizosaccharomyces pombe GN=rps18a PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.098e-49 Identity = 90/132 (68.18%), Postives = 110/132 (83.33%), Query Frame = 2 Query: 71 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 V ++FQHILR+LNTNVDGK K+MFA+T IKG+GRR ANIVCKKAD+DM+KRAGEL+ EL+ ++ ++ NP QFKIP WFLNRQKD DGK Q+++N +D KLR+DLERLKKI+ HRGLRH LRVRGQH Sbjct: 4 VVPDNFQHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTIIQNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRVRGQH 135
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_DICDI (40S ribosomal protein S18 OS=Dictyostelium discoideum GN=rps18 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.644e-47 Identity = 83/127 (65.35%), Postives = 108/127 (85.04%), Query Frame = 2 Query: 83 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 463 +FQHI+R+ NTNVDG++KI +ALT +KG+GRR AN+VCKKAD+D +KRAGELS E++ L ++ +PRQ+ IP WFLNRQKD KDGKYS ++N +D+K R+DLERLKKIR HRG+RH++GLRVRGQ Sbjct: 10 EFQHIIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIMNHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRVRGQ 136
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_YEAST (40S ribosomal protein S18 OS=Saccharomyces cerevisiae GN=RPS18A PE=1 SV=4) HSP 1 Score: 184.496 bits (467), Expect = 4.306e-46 Identity = 84/127 (66.14%), Postives = 106/127 (83.46%), Query Frame = 2 Query: 86 FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 FQHILR+LNTNVDG KI++ALT+IKG+GRR +N+VCKKADVD++KRAGEL+ EL+ ++ ++ NP +KIP WFLNRQ D DGK ++N ++ KLRDDLERLKKIR HRG+RH+WGLRVRGQH Sbjct: 11 FQHILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRGQH 137
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS18_ENTHI (40S ribosomal protein S18 OS=Entamoeba histolytica GN=RPS18 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.212e-42 Identity = 76/131 (58.02%), Postives = 107/131 (81.68%), Query Frame = 2 Query: 74 ANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 466 + +FQH+LRV NTN+DG++K+ +ALT IKG GRR A +VCK+A +D+NKRAG ++ AE++ ++ ++ +KIP WFLNRQKD KDGK SQ+++NA++ +LR+D+E LKK+R HRGLRHYWGLRVRGQ+ Sbjct: 6 SESEFQHMLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILTTQLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRVRGQN 136
BLAST of CX675189 vs. ExPASy Swiss-Prot
Match: RS13_METST (30S ribosomal protein S13P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps13p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.625e-27 Identity = 55/131 (41.98%), Postives = 87/131 (66.41%), Query Frame = 2 Query: 71 VANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 463 +A ++F+H++R+ +VDG I ALT I+GIG+ A +CK D+D + + G + + + V+ NP++F IP+WFLNR+ DY+ G+ ++ + L+M LRDDL R+K IR+++G RH GL VRGQ Sbjct: 1 MAEQEFRHMVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVLENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPVRGQ 131 The following BLAST results are available for this feature:
BLAST of CX675189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675189 ID=CX675189; Name=CX675189; organism=Citrus sinensis; type=EST; length=668bpback to top |