CX043710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG3_HUMAN (ADP-ribosylation factor GTPase-activating protein 3 OS=Homo sapiens GN=ARFGAP3 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29 Identity = 65/108 (60.19%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILAKEVAKSMAEEA 337 K+CFDC AKNP+WAS+TYG+FLCIDCS HRSLGVH+SF+RST LDS WS QL+ M GGN A FF QHG + AKY SRAA+LY +E KS+A +A Sbjct: 23 KVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCST-NDTNAKYNSRAAQLY-----REKIKSLASQA 124
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG2_RAT (ADP-ribosylation factor GTPase-activating protein 2 OS=Rattus norvegicus GN=Arfgap2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29 Identity = 86/227 (37.89%), Postives = 116/227 (51.10%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILAKEVAKSMAEEAGLXXXXXXXXXXXXXXXLPDVKIQDAPKENYQ------------GRQE----------TQDAPG--------SPKVSHTVLTSTV--KKPLGAKKS-GKTGGLGARKLTSKPSESLYEQ 595 K CFDC AK+P+WAS+TYG+FLCIDCS VHRSLGVH+SF+RST LDS WS QL+ M GGN A FF+QHG KY SRAA++Y++ + + + ++A P+ K D E+ Q G Q+ Q PG SP+ S + +S + KKP AKK G GLGA+K++++ + Q Sbjct: 24 KACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWLQLRCMQVGGNANATAFFRQHGCL-ANDANTKYNSRAAQMYREKIRQLGSTALARHG---TDLWIDNMNSAPSHSPEKKDSDFFTEHTQAPAWDTAATDPSGTQQPALPSESSSLAQPEPGPNTDLLGTSPQASLELKSSIIGKKKPAAAKKGLGAKKGLGAQKVSNQSFTEIERQ 246
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG2_PONAB (ADP-ribosylation factor GTPase-activating protein 2 OS=Pongo abelii GN=ARFGAP2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29 Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQ 295 K CFDC AKNP+WAS+TYG+FLCIDCS VHRSLGVH+SF+RST LDS W+ QL+ M GGN A FF+QHG T KY SRAA++Y++ Sbjct: 24 KACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWNWFQLRCMQVGGNANATAFFRQHGCT-ANDANTKYNSRAAQMYRE 116
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG2_MOUSE (ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus GN=Arfgap2 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28 Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQ 295 K CFDC AK+P+WAS+TYG+FLCIDCS VHRSLGVH+SF+RST LDS WS QL+ M GGN A FF+QHG KYTSRAA++Y++ Sbjct: 24 KACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWLQLRCMQVGGNANATAFFRQHGCM-ANDANTKYTSRAAQMYRE 116
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG3_MOUSE (ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus GN=Arfgap3 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 5.231e-28 Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILAKEVAKSMAEEA 337 K+CFDC AKNP+WAS++YG+FLCIDCS HRSLGVH+SF+RST LDS WS QL+ M GGN+ A FF QHG AKY SRAA+LY +E K++A +A Sbjct: 23 KVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNSNASSFFHQHGCAT-KDTNAKYNSRAAQLY-----REKIKTLATQA 124
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ARFG3_RAT (ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus GN=Arfgap3 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27 Identity = 63/108 (58.33%), Postives = 76/108 (70.37%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDS-WSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQILAKEVAKSMAEEA 337 K+CFDC AKNP+WAS++YG+FLCIDCS HRSLGVH+SF+RST LDS WS QL+ M GGN A FF QHG AKY SRAA+LY +E K++A +A Sbjct: 23 KVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCAT-KDTNAKYNSRAAQLY-----REKIKTLATQA 124
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGD6_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana GN=AGD6 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25 Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYK 292 K+C DC KNP WASV+YGIF+C++CS HR LGVHISFVRS +DSWSA Q+K M GGN R FF Q+G I +KY S AA +Y+ Sbjct: 17 KVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSAIQIKKMEAGGNERLNKFFAQYGIAKETDIISKYNSNAASVYR 108
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: YDBH_SCHPO (Uncharacterized protein C22E12.17c OS=Schizosaccharomyces pombe GN=SPAC22E12.17c PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFV---RSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWT---DGGKIEAKYTSRAAELYKQILAKEVAKSMAEE 334 K+CFDC AKNPTW+S T+GI+LC+DCSA HR++GVHISFV RST LDSW+ QL++M GGN A+ +FK+HG + KY+S+ A+ Y + L KS+A E Sbjct: 22 KVCFDCGAKNPTWSSTTFGIYLCLDCSAAHRNMGVHISFVRFLRSTVLDSWTYAQLRVMRVGGNENARNYFKRHGGVSLLNSKDCRLKYSSKTAKQYLEKL-----KSLAVE 128
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGD7_ARATH (ADP-ribosylation factor GTPase-activating protein AGD7 OS=Arabidopsis thaliana GN=AGD7 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.509e-24 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYK 292 K+C DC+ KNP WAS++YGIF+C++CS HR LGVHISFVRS +DSWS Q+K M GGN R F Q+G + I +KY S AA +Y+ Sbjct: 17 KVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMDAGGNERLNNFLAQYGISKETDIISKYNSNAASVYR 108
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: GLO3_YEAST (ADP-ribosylation factor GTPase-activating protein GLO3 OS=Saccharomyces cerevisiae GN=GLO3 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.642e-23 Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 17 KMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFF-----KQHGWTDGGKIEAKYTSRAAELYKQILAKEVAKSM 325 ++CFDC KNPTW SV +G+ LCI CSAVHR++GVHI+FV+S+ LD W+ L+ GGN++A+ FF KQ T + KYTS A+ YK L K+V K M Sbjct: 29 RVCFDCGNKNPTWTSVPFGVMLCIQCSAVHRNMGVHITFVKSSTLDKWTINNLRRFKLGGNHKARDFFLKNNGKQLLNTANVDAKTKYTSPVAKKYKIHLDKKVQKDM 136 The following BLAST results are available for this feature:
BLAST of CX043710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043710 ID=CX043710; Name=CX043710; organism=Citrus sinensis; type=EST; length=773bpback to top |