CX043710

Overview
NameCX043710
Unique NameCX043710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: SPS18_YEAST (Sporulation protein SPS18 OS=Saccharomyces cerevisiae GN=SPS18 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 33/98 (33.67%), Postives = 59/98 (60.20%), Query Frame = 2
Query:   23 CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFKQHGWTDGG-KIEAKYTSRAAELYKQILAKEV 313
            CF+C + NP + S ++GIF+C++C+ + R +G +I  V+S  +D++  + ++ +   GNNR   F  ++G    G  +  KY +  A+ YK+ LA EV
Sbjct:   28 CFECKSVNPQFVSCSFGIFICVNCANLLRGMGTNIFCVKSITMDNFEEKDVRRVEKSGNNRFGSFLSKNGILQNGIPLREKYDNLFAKSYKRRLANEV 125          
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGE2_YEAST (ADP-ribosylation factor GTPase-activating protein effector protein 2 OS=Saccharomyces cerevisiae GN=AGE2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 2
Query:   23 CFDCNAK-NPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQL-KMMVYGGNNRAQVFFK 223
            C DC A+ +P WAS + G+F+CI C+ +HRSLG HIS V+S +LD+W  E L K++ +  N RA  +++
Sbjct:   23 CADCKAQLHPRWASWSLGVFICIKCAGIHRSLGTHISKVKSVDLDTWKEEHLVKLIQFKNNLRANSYYE 91          
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGAP9_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9 OS=Homo sapiens GN=AGAP9 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 2
Query:   23 CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 208
            C DC  +NP WAS+  G+ +CI+CS +HRS G  +S VRS  LD W  E  K+M   GN  A
Sbjct:  524 CVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELDDWPVELRKVMSSIGNELA 585          
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGAP8_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8 OS=Homo sapiens GN=AGAP8 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 2
Query:   23 CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 208
            C DC  +NP WAS+  G+ +CI+CS +H SLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  456 CVDCETQNPKWASLNLGVLMCIECSGIHHSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 517          
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGA10_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 10 OS=Homo sapiens GN=AGAP10 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 2
Query:   23 CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 208
            C DC  +NP WAS+  G+ +CI+CS +HRS G  +S VRS  LD W  E  K+M   GN  A
Sbjct:  479 CVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELDDWPVELRKVMSSIGNELA 540          
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: CTLFB_HUMAN (Putative centaurin-gamma-like family member 11P OS=Homo sapiens GN=CTGLF11P PE=5 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 2
Query:   23 CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 208
            C DC  +NP WAS+  G+ +CI+CS +H SLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  464 CVDCETQNPKWASLNLGVLMCIECSGIHCSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 525          
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: AGAP5_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 5 OS=Homo sapiens GN=AGAP5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.406e-11
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 2
Query:   23 CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 208
            C D   +NP WAS+  G+ +CI+CS +HRSLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  456 CVDYETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 517          
BLAST of CX043710 vs. ExPASy Swiss-Prot
Match: ADAP1_HUMAN (Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens GN=ADAP1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11
Identity = 28/67 (41.79%), Postives = 43/67 (64.18%), Query Frame = 2
Query:   23 CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 223
            C DC A +P WAS T G+F+C+ CS +HR++   +S V+S  LD+W   Q++ M   GN+ A+  F+
Sbjct:   21 CADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFE 86          
The following BLAST results are available for this feature:
BLAST of CX043710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
SPS18_YEAST6.864e-1233.67Sporulation protein SPS18 OS=Saccharomyces cerevis... [more]
AGE2_YEAST6.864e-1246.38ADP-ribosylation factor GTPase-activating protein ... [more]
AGAP9_HUMAN6.864e-1248.39Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP8_HUMAN6.864e-1248.39Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGA10_HUMAN6.864e-1248.39Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
CTLFB_HUMAN1.529e-1148.39Putative centaurin-gamma-like family member 11P OS... [more]
AGAP5_HUMAN3.406e-1148.39Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
ADAP1_HUMAN9.911e-1141.79Arf-GAP with dual PH domain-containing protein 1 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13A01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13A01-B1-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043710 ID=CX043710; Name=CX043710; organism=Citrus sinensis; type=EST; length=773bp
GTTCCATGCACCTCGTAAGATGTGTTTTGATTGTAATGCTAAGAACCCGA
CGTGGGCCTCGGTGACTTACGGGATCTTTCTCTGCATCGATTGCTCTGCC
GTTCACCGTAGTCTCGGTGTCCACATCAGCTTCGTTAGGTCAACAAATTT
AGACTCATGGAGTGCTGAGCAGTTGAAAATGATGGTGTATGGAGGAAACA
ACCGTGCACAAGTTTTCTTTAAGCAGCATGGATGGACAGATGGAGGCAAA
ATTGAGGCTAAGTATACCTCAAGAGCTGCTGAATTATACAAGCAGATTCT
TGCGAAAGAAGTTGCTAAAAGTATGGCAGAAGAGGCAGGCTTGCCATCAT
CACCTGTTGCCTCGCAGCCGGCACAAGCAGCTAATGCACTTCCAGATGTT
AAGATCCAGGATGCTCCTAAAGAAAATTATCAAGGAAGGCAAGAAACTCA
AGACGCTCCTGGTTCGCCAAAAGTTTCTCATACAGTTCTTACTAGTACCG
TCAAAAAACCACTTGGTGCAAAGAAATCAGGGAAGACTGGGGGTCTAGGT
GCCCGAAAGCTGACTTCAAAGCCAAGTGAAAGTCTATATGAGCAGAAGCC
TGAAGAACCTTCTGTCCCTATTTCTTCCTCAACCAGCAACACATCGTCAG
TTAGTTTGCCCTTTGCTTCTCGCTTTGAGTATGTGGATAATGTCCAATCT
TCCGAGTTGAGTTCTGGTGGTCCACAAGTGCTTAGCCATGTAGCTCCACC
AAAGTCCGTCAGCTTCTTTGCTG
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