CK936749

Overview
NameCK936749
Unique NameCK936749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK5 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.210e-16
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGD-AVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A+ V+     A+D  GTGGDG  T NIST A+I+ A+ G KVAK G+
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK1 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=trpD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.210e-16
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGD-AVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A+ V+     A+D  GTGGDG  T NIST A+I+ A+ G KVAK G+
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SACEN (Anthranilate phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.580e-16
Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            L+  L++  DL+  +   ++D ++  EA  A ++AF+V LRAKGET  E+ G+A AM+ ++  +E    AVDIVGTGGD + +VNIST ASI+VAA G  V K G+
Sbjct:   11 LLGHLVAGNDLSAEDTAWAMDLVMTGEATPARVAAFVVALRAKGETPAEVRGMADAMLSHSRPLEIRRRAVDIVGTGGDRSGSVNISTMASIVVAAAGVPVVKHGN 116          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.580e-16
Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            ++ R DL+++E    +D +++ EA  A I+AF+  LR KGET  EI G AR M   A ++                 L   +D+VGTGGDG NT NIST  S +VAACG KVAK G+
Sbjct:    9 VVEREDLSQSEMIQVMDQIMSGEATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGN 125          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.580e-16
Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE-GLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G AR+M + A +++      VD  GTGGDGA+T NIST ++ +VA CG  VAK G+
Sbjct:    3 SELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.580e-16
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  +++R DLT+AEA + ++ ++N  A  A I+AFL  L  KGET  EI G+A  M + A  V   G  +D  GTGGDGA+T NIST A+ + A  G  VAK G+
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMNGTATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_RHIEC (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.064e-16
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:   27 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M    + VE   DA+DIVGTGGD + T NIST A+++VA  G  VAK G+
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_RHIE6 (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.064e-16
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:   27 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M    + VE   DA+DIVGTGGD + T NIST A+++VA  G  VAK G+
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_MAGSA (Anthranilate phosphoribosyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=trpD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.064e-16
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E++  +     L+E +A+   + +++ +A  A I   L+ LR +GET  EI G AR M   A+K+E    +VDIVGTGGD A T NIST AS +VAACG  VAK G+
Sbjct:   13 EILGRVAVGASLSETQAEEVFEIIMSGDATPAQIGGLLLGLRVRGETVEEITGAARIMRAKALKIEAPPGSVDIVGTGGDEAGTFNISTAASFVVAACGVPVAKHGN 119          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.064e-16
Identity = 52/117 (44.44%), Postives = 69/117 (58.97%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            ++ R+DLTEAE    +D +++  A  A I+AF+  LR KGET  EI G AR M   A  +   +G+ D             +D+VGTGGDG NT NIST  S +VA+CG KVAK G+
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGGATPAQIAAFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGN 125          
The following BLAST results are available for this feature:
BLAST of CK936749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
TRPD_CLOK51.210e-1643.12Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CLOK11.210e-1643.12Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_SACEN1.580e-1646.23Anthranilate phosphoribosyltransferase OS=Saccharo... [more]
TRPD_GEOSF1.580e-1642.74Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_DESAA1.580e-1642.20Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_CHLAD1.580e-1645.79Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_RHIEC2.064e-1647.00Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHIE62.064e-1647.00Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_MAGSA2.064e-1644.86Anthranilate phosphoribosyltransferase OS=Magnetos... [more]
TRPD_GEOSL2.064e-1644.44Anthranilate phosphoribosyltransferase OS=Geobacte... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936749 ID=CK936749; Name=CK936749; organism=Citrus sinensis; type=EST; length=324bp
TTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCG
GAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTT
GATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAG
AGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTATGAAGGTGGAA
GGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAA
CACAGTGAACATTTCAACTGGTGCTTCAATTCTTGTTGCAGCTTGTGGTG
CAAAAGTTGCCAAGCAAGGGAGTC
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