CK936749

Overview
NameCK936749
Unique NameCK936749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_RHORT (Anthranilate phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16
Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 3
Query:   39 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            L+EA+A  + + +++  A  A I  FL+ LR +GET  EI   AR M   A +++    A+DIVGTGGD A T NIST A+++ AACG  VAK G+
Sbjct:   24 LSEADATRAFEAIMSGNATPAQIGGFLMALRVRGETVAEITAAARTMRDKAARIQAPAGAIDIVGTGGDCAGTYNISTAAALVTAACGVPVAKHGN 119          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PELPD (Anthranilate phosphoribosyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDI---------------VGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            ++ + DLTE E    +  ++  EA  A I AF+  LR KGET  EI G AR M ++A ++    D +DI               VGTGGDG NT N+ST  + +V+ACG KVAK G+
Sbjct:    9 IVEQKDLTEGEMIEVMGQIMTGEATPAQIGAFITALRMKGETIDEITGAARVMREHATRIRAGKDLLDIDRDDINIDRETILDVVGTGGDGTNTFNVSTTVAFVVSACGVKVAKHGN 125          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_NOVAD (Anthranilate phosphoribosyltransferase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16
Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 3
Query:   39 LTEAEAQASLDYLLNEA--DEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            L EAEA+A+   +L+ A  DEA I+ FLV L  +GE   EI G ARAM    + ++   +A+D+ GTGGDG +T+N+ST  S++VAACG  VAK G+
Sbjct:   11 LEEAEAEAAFAAILDGAVADEA-IARFLVGLSDRGENASEIAGAARAMRARMIPIKAPANAIDVCGTGGDGHHTLNVSTAVSLVVAACGVPVAKHGN 106          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_CHLSY (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16
Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + A  V   G  +D  GTGGDGA+T NIST A+ + A  G  VAK G+
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAA (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16
Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + A  V   G  +D  GTGGDGA+T NIST A+ + A  G  VAK G+
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVY (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=trpD PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.024e-15
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLG-DAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +I+ L  +  LTE E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ + AACG KVAK G+
Sbjct:    4 IINKLYLQESLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.024e-15
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYA--MKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  L    DL+  EA+A+L+ +L+ A++  I  FL+ L+AKGE   EIVG  R M K    +K       VD  GTGGDG NT+N+ST A+I+ AA G  VAK G+
Sbjct:    6 EYIKKLEEGCDLSSEEAEAALEEVLSTAEDGEIETFLLALKAKGEKPQEIVGFVRGMKKAGNMIKPNTPFRIVDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGN 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METM5 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.024e-15
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A+K++ LG+  D  GTGGDG+ T+N+ST  SI++ AC  KVAK G+
Sbjct:    1 MLNKLIERENLSFKESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIIL-ACFTKVAKHGN 102          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSEAE (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYA--MKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++++DLT  E QA +  ++  +  +A I AFL+ +R K ET  EIVG    M + A  +++  L   VD+VGTGGDGAN  N+S+ AS +VAA G KVAK G+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGN 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSEAB (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYA--MKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++++DLT  E QA +  ++  +  +A I AFL+ +R K ET  EIVG    M + A  +++  L   VD+VGTGGDGAN  N+S+ AS +VAA G KVAK G+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGN 113          
The following BLAST results are available for this feature:
BLAST of CK936749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
TRPD_RHORT7.842e-1645.83Anthranilate phosphoribosyltransferase OS=Rhodospi... [more]
TRPD_PELPD7.842e-1641.03Anthranilate phosphoribosyltransferase OS=Pelobact... [more]
TRPD_NOVAD7.842e-1648.45Anthranilate phosphoribosyltransferase OS=Novosphi... [more]
TRPD_CHLSY7.842e-1644.86Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLAA7.842e-1644.86Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_VIBVY1.024e-1545.79Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_METMA1.024e-1545.37Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_METM51.024e-1545.71Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_PSEAE1.338e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEAB1.338e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936749 ID=CK936749; Name=CK936749; organism=Citrus sinensis; type=EST; length=324bp
TTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCG
GAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTT
GATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAG
AGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTATGAAGGTGGAA
GGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAA
CACAGTGAACATTTCAACTGGTGCTTCAATTCTTGTTGCAGCTTGTGGTG
CAAAAGTTGCCAAGCAAGGGAGTC
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