CK936749

Overview
NameCK936749
Unique NameCK936749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA8 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYA--MKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++++DLT  E QA +  ++  +  +A I AFL+ +R K ET  EIVG    M + A  +++  L   VD+VGTGGDGAN  N+S+ AS +VAA G KVAK G+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGN 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METRJ (Anthranilate phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   39 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            L  AEA+A+ D LL+ E       AFL  L+ +GE+  EIVG A AM     +V    +AVD+VGTGGD + +VN+ST A+I+VAACG  VAK G+
Sbjct:   17 LDRAEARAAFDDLLSGEVTPVQAGAFLTALKVRGESVEEIVGAAEAMRARMTRVAAPENAVDVVGTGGDHSGSVNVSTLAAIVVAACGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPC (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Corby) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R K ET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S +VAA G KVAK G+
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKSETVNELTAAAKVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_LACCA (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            + I+ +++  +LT  E +A LD ++N EA E   ++ L  L AK  T  EI G A +M  +A+      D ++IVGTGGD ANT NIST ++I+VAA G +VAK G+
Sbjct:    4 QAIEKVVNHENLTFEETEAVLDEIMNGEASEVQTASLLTALTAKNPTIDEIAGAAASMRSHALAFPETKDVLEIVGTGGDHANTFNISTTSAIVVAATGTRVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_LACC3 (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei (strain ATCC 334) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            + I+ +++  +LT  E++A LD ++N EA E   ++ L  L AK  T  EI G A +M  +A+      D ++IVGTGGD ANT NIST ++I+VAA G +VAK G+
Sbjct:    4 QAIEKVVNHENLTFEESEAVLDEIMNGEASEVQTASLLTALTAKNPTIDEIAGAAASMRSHALAFPETKDVLEIVGTGGDHANTFNISTTSAIVVAATGTQVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_VIBPA (Anthranilate phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLG-DAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +I+ L  +  LT+ E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ + AACG KVAK G+
Sbjct:    4 IINKLYEQQSLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SULSO (Anthranilate phosphoribosyltransferase OS=Sulfolobus solfataricus GN=trpD PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            NE++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A+K++ + +A+D  GTGGDG  TVN+ST ++IL++     VAK G+
Sbjct:    4 NEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLVN-PVAKHGN 109          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +I  L + V L+  E+  + D +++ EA  + + A L+ LR +GET  EI G   AM    ++V    DAVD+VGTGGDG+ +VN+ST AS +VA  G  VAK G+
Sbjct:    7 IIGKLATGVTLSREESAGAFDAMMSGEATPSQMGALLMALRVRGETVEEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_NITHX (Anthranilate phosphoribosyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            LI  + +   LT  EA  + D +++ EA  + +   L+ LR +GET  EI G   AM    ++V    DAVD+VGTGGDG+ +VN+ST AS +VA  G  VAK G+
Sbjct:    7 LIGKVATGATLTREEASCAFDSMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLRVTAPADAVDVVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_NATPD (Anthranilate phosphoribosyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 3
Query:   36 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE-GLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            DLT+AEA+ +   +  EA EA I A L  LRAKGET  EI G A  M   A +++      VD  GTGGDG +T+N+ST +S +VA  G  VAK G+
Sbjct:   13 DLTQAEAREAASLVFEEATEAQIGALLSALRAKGETEPEIAGFAEGMRAAARRIDPDRSPLVDTCGTGGDGHDTINVSTTSSFVVAGAGVPVAKHGN 109          
The following BLAST results are available for this feature:
BLAST of CK936749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
TRPD_PSEA81.338e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METRJ1.338e-1548.96Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_LEGPC1.338e-1542.45Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LACCA1.338e-1542.99Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_LACC31.338e-1542.99Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_VIBPA1.747e-1544.86Anthranilate phosphoribosyltransferase OS=Vibrio p... [more]
TRPD_SULSO1.747e-1545.37Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_RHOPB1.747e-1542.45Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_NITHX1.747e-1542.45Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_NATPD1.747e-1547.42Anthranilate phosphoribosyltransferase OS=Natronom... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936749 ID=CK936749; Name=CK936749; organism=Citrus sinensis; type=EST; length=324bp
TTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCG
GAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTT
GATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAG
AGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTATGAAGGTGGAA
GGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAA
CACAGTGAACATTTCAACTGGTGCTTCAATTCTTGTTGCAGCTTGTGGTG
CAAAAGTTGCCAAGCAAGGGAGTC
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