CK936749

Overview
NameCK936749
Unique NameCK936749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_EUBE2 (Anthranilate phosphoribosyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  L+ + DLT  +    ++ ++  EA +A  +AFL  L AKGET  EI   AR +  +  K     D ++IVGTGGDG+N++NIST ASI+V+A G  VAK G+
Sbjct:    4 EAIAKLVKKEDLTAGQMNDVMEEIMTGEATDAQKAAFLTALAAKGETIDEITAAARVLRAHCEKFLNDMDVLEIVGTGGDGSNSINISTLASIIVSAAGIPVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_DESPS (Anthranilate phosphoribosyltransferase OS=Desulfotalea psychrophila GN=trpD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.747e-15
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE-GLGD---AVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++  DL+E+E  AS++ +++ +A  A I++F+  LR KGE   EIVG  R M   A  ++ GLG     +DIVGTGGDGA+T N+ST  S +VAA G  VAK G+
Sbjct:   19 VVTGADLSESEMMASMEEVMSGQASPAQIASFITALRMKGEAVEEIVGAVRVMRDKATFIDCGLGPDDILMDIVGTGGDGADTFNVSTTTSFVVAAAGVAVAKHGN 124          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGD-AVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A+K+E   D  +D  GTGGDG  T NIST  +I+ +A G KVAK G+
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGD-AVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A+K+E   D  +D  GTGGDG  T NIST  +I+ +A G KVAK G+
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 3
Query:   39 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            LT  EA ++ D +++ +A  + + A L+ LR +GET  EI G    M    + V+   DAVDIVGTGGDG+ +VN+ST AS +VA CG  VAK G+
Sbjct:   17 LTRDEAASAFDGMMSGDATPSQMGALLMGLRVRGETVDEITGAVSTMRAKMLTVDAPADAVDIVGTGGDGSGSVNVSTCASFIVAGCGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 46/104 (44.23%), Postives = 66/104 (63.46%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYA--MKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++++DLT  E QA +  ++     +A I AFL+ +R K ET  EIVG    M + A  +++  L   VD+VGTGGDGAN  N+S+ AS +VAA G KVAK G+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGRCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGN 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METM7 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 47/105 (44.76%), Postives = 70/105 (66.67%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A+K++ LG+  D  GTGGDG+ T+N+ST  SI++ +C  KVAK G+
Sbjct:    1 MLNKLIERENLSFEESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIIL-SCFTKVAKHGN 102          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_BACST (Anthranilate phosphoribosyltransferase OS=Bacillus stearothermophilus GN=trpD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.282e-15
Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = 3
Query:   39 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            LTEAEA  +++ +++ EA ++ I++ + +LR +GET  EI G  RAM      ++   D +D  GTGGDGA T N+ST A+I+V++ G KVAK G+
Sbjct:   15 LTEAEAYEAMNAVMSGEATDSQIASLVSILRVRGETVDEIAGFVRAMRDRMTTIDAGDDVIDTCGTGGDGAATFNVSTAAAIVVSSLGVKVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSE14 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE--GLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++++DLT  E +  + + +  +  EA I AFL+ +R K ET  EIVG    M + A  VE   L   VDIVGTGGDGAN  N+ST ++ ++AA G KVAK G+
Sbjct:   10 VVNQLDLTTDEMRDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELASSVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCKVAKHGN 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_NITWN (Anthranilate phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            LI  + +   LT  EA A+ + +++ EA  + +   L+ LR +GET  EI G   AM    ++V+   DAVD+VGTGGDG+ +VN+ST AS +VA  G  VAK G+
Sbjct:    7 LIGKVATGATLTREEAAAAFNSMMSGEATPSQMGGLLMALRVRGETVDEITGAVSAMRSMMLRVKAPVDAVDVVGTGGDGSGSVNVSTCASFIVAGAGVTVAKHGN 112          
The following BLAST results are available for this feature:
BLAST of CK936749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
TRPD_EUBE21.747e-1543.93Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_DESPS1.747e-1545.28Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_THEPX2.282e-1543.52Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP32.282e-1543.52Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_RHOPS2.282e-1545.83Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_PSEA72.282e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METM72.282e-1544.76Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_BACST2.282e-1543.75Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_PSE142.980e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_NITWN2.980e-1542.45Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936749 ID=CK936749; Name=CK936749; organism=Citrus sinensis; type=EST; length=324bp
TTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCG
GAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTT
GATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAG
AGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTATGAAGGTGGAA
GGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAA
CACAGTGAACATTTCAACTGGTGCTTCAATTCTTGTTGCAGCTTGTGGTG
CAAAAGTTGCCAAGCAAGGGAGTC
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