CK936749

Overview
NameCK936749
Unique NameCK936749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METBU (Anthranilate phosphoribosyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15
Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAM----KVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            LI   DL+  E++A++  +L  A +A + AF++ ++ KGET  E+ G A+ M+  A     KV+G+   VD  GTGGD  NT+NIST A+I+ AA G  VAK G+
Sbjct:    8 LIDGHDLSMVESEAAMGQILESATDAQVGAFVMGMKMKGETSDEVAGFAKGMLNVANMIRPKVDGI--LVDTCGTGGDRHNTINISTAAAIVAAAAGVTVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15
Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGD--AVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  L    DL+  EA+A++  +L+ A++  I AFL+ LRAKGE   EI G  R M +    ++ +     +D  GTGGDG NT+N+ST A+I+ AA G  VAK G+
Sbjct:    6 EYIKKLEEGSDLSSEEAEAAIGEILSTAEDEEIGAFLLALRAKGEKPQEIAGFVRGMKQAGNTIKPVTPFRVIDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGN 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_LACCB (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei (strain BL23) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.980e-15
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            + I+ +++  +LT  E++A LD ++N EA E   ++ L  L AK  T  EI G A +M  +A+      D ++IVGTGGD ANT NIST ++I+VAA G +VAK G+
Sbjct:    4 QAIEKVVNHENLTFEESEAVLDEIMNGEAYEVQTASLLTALTAKNPTIDEIAGAAASMRSHALAFPETKDVLEIVGTGGDHANTFNISTTSAIVVAATGTQVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SULIY (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A+K++ + +A+D  GTGGDG  TVN+ST ++IL++     VAK G+
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLIN-PVAKHGN 109          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SULIN (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A+K++ + +A+D  GTGGDG  TVN+ST ++IL++     VAK G+
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLIN-PVAKHGN 109          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SULIM (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A+K++ + +A+D  GTGGDG  TVN+ST ++IL++     VAK G+
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLIN-PVAKHGN 109          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SULIL (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A+K++ + +A+D  GTGGDG  TVN+ST ++IL++     VAK G+
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLIN-PVAKHGN 109          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SULIK (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A+K++ + +A+D  GTGGDG  TVN+ST ++IL++     VAK G+
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLIN-PVAKHGN 109          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SULIA (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A+K++ + +A+D  GTGGDG  TVN+ST ++IL++     VAK G+
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLIN-PVAKHGN 109          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPK (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain KT2440) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE--GLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S ++AA G  VAK G+
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGN 113          
The following BLAST results are available for this feature:
BLAST of CK936749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
TRPD_METBU2.980e-1542.86Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_METAC2.980e-1542.59Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_LACCB2.980e-1542.99Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_SULIY3.892e-1544.44Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIN3.892e-1544.44Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIM3.892e-1544.44Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIL3.892e-1544.44Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIK3.892e-1544.44Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIA3.892e-1544.44Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_PSEPK3.892e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936749 ID=CK936749; Name=CK936749; organism=Citrus sinensis; type=EST; length=324bp
TTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCG
GAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTT
GATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAG
AGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTATGAAGGTGGAA
GGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAA
CACAGTGAACATTTCAACTGGTGCTTCAATTCTTGTTGCAGCTTGTGGTG
CAAAAGTTGCCAAGCAAGGGAGTC
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