CK936749

Overview
NameCK936749
Unique NameCK936749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSEP1 (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE--GLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S ++AA G  VAK G+
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGN 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METNO (Anthranilate phosphoribosyltransferase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   39 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   EIVG A A+ +  ++V     A+DIVGTGGD + + N+ST A+I+ A+CG  VAK G+
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAADEIVGAAGALRERMVRVAAPPGAIDIVGTGGDHSGSYNVSTLAAIITASCGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METM6 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.892e-15
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 3
Query:    9 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++ +I R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A+K++ LG+  D  GTGGDG+ T+N+ST  SI++ +C  KVAK G+
Sbjct:    1 MLNKIIERENLSFEESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIIL-SCFTKVAKHGN 102          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_SYNFM (Anthranilate phosphoribosyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=trpD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.083e-15
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 3
Query:   21 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDA-VDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +I R DL+E E  A +  +++ EA +A I AF+  L  KGETF E+ G AR M + A +++      VD  GTGGD   T NIST A+ +VA CG  VAK G+
Sbjct:    9 IIQREDLSETEMSAVMSEIMSGEATDAQIGAFMGALATKGETFEELAGAARTMRRKAARIQVTSPVIVDTCGTGGDRKGTFNISTTAAFVVAGCGVTVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.083e-15
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:   27 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM    + VE    A+DIVGTGGDGA T NIST A+++VA  G  VAK G+
Sbjct:   13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPDGAIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGN 112          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU2 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.083e-15
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 3
Query:   21 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVE--GLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            +++++DLT  E +    + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ ++AA G  VAK G+
Sbjct:   14 VVNQLDLTTEEMSDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELAGKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGN 117          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_METS3 (Anthranilate phosphoribosyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=trpD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.083e-15
Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I  +++  DL   EA  ++D +++ E+ E  +SA+L  L  KGET  EI    +AM  + +K+    + ++IVGTGGDG+NT NIST +SI+++A G  VAK G+
Sbjct:    4 EAILKVVNGNDLNAKEAYGAMDEIMSGESSEVQMSAYLTALSMKGETIEEITASTKAMRAHCVKLLNDEEVLEIVGTGGDGSNTFNISTTSSIVISAAGVPVAKHGN 110          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_THICR (Anthranilate phosphoribosyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.639e-15
Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDA---VDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            + ++ L+++ DLT  + +  +  L++ +A  A I+A LV LRAKGET  EI   A  M   A +V  L D    VD  GTGGDGANT NIST ++ + AA GAKVAK GS
Sbjct:    5 DALEQLLNKHDLTAEQMEWVMQMLMSGQATSAQIAAILVALRAKGETVEEITAAASVMRSLATQVT-LTDKTHMVDTCGTGGDGANTFNISTASAFVAAAAGAKVAKHGS 113          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_HERA2 (Anthranilate phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.639e-15
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKVEGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            + I  + +R DL++ +A A ++ ++N EA  A I+A L  L  KGET  EI G+A+ M   ++ V   G  VD  GTGGD +NT NIST A+ + A  GA VAK G+
Sbjct:    5 DAIITVTNRTDLSQDDAAAVMEQMMNGEATPAQIAALLTALHFKGETDAEIAGMAQVMRAKSLAVPHDGGVVDTCGTGGDHSNTFNISTTAAFVAAGAGATVAKHGN 111          
BLAST of CK936749 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.639e-15
Identity = 49/110 (44.55%), Postives = 63/110 (57.27%), Query Frame = 3
Query:    6 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAMKV----EGLGDAVDIVGTGGDGANTVNISTGASILVAACGAKVAKQGS 323
            E I+ +    DLT+AEA+A    +  +A EA I A L  LRAKGET  EI G A  M   A  +    EGL   VD  GTGGD  NT+N+ST ++I+ A  G  +AK G+
Sbjct:    3 EYIERVTDGDDLTQAEARAVATTVFEDATEAQIGALLTALRAKGETEAEIAGFAEGMRDAARTIRPDREGL---VDTCGTGGDDYNTINVSTTSAIVAAGAGVPIAKHGN 109          
The following BLAST results are available for this feature:
BLAST of CK936749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
TRPD_PSEP13.892e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METNO3.892e-1545.83Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METM63.892e-1543.81Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_SYNFM5.083e-1544.66Anthranilate phosphoribosyltransferase OS=Syntroph... [more]
TRPD_RHIME5.083e-1545.00Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PSEU25.083e-1544.23Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METS35.083e-1541.12Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_THICR6.639e-1546.36Anthranilate phosphoribosyltransferase OS=Thiomicr... [more]
TRPD_HERA26.639e-1542.99Anthranilate phosphoribosyltransferase OS=Herpetos... [more]
TRPD_HALMA6.639e-1544.55Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936749 ID=CK936749; Name=CK936749; organism=Citrus sinensis; type=EST; length=324bp
TTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGAGGCG
GAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGGCCTT
GATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTTGGAG
AGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTATGAAGGTGGAA
GGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAA
CACAGTGAACATTTCAACTGGTGCTTCAATTCTTGTTGCAGCTTGTGGTG
CAAAAGTTGCCAAGCAAGGGAGTC
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