CK936745

Overview
NameCK936745
Unique NameCK936745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.203e-57
Identity = 105/219 (47.95%), Postives = 142/219 (64.84%), Query Frame = 1
Query:   43 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            KAFGWAA+D+SGHLSPF+F+RR+   +DV LK+LYCG+CH+DL  +KN+WGF+ +P+VPGHEIAG VT+                     +C  CE C  DLE+YCPK + TY+S    GT T GGYSD +V ++R++++FPD++PLDA APLLCAGITVYSP+KY+G+ E                              IS+SP+K++EA++ LGAD
Sbjct:    5 KAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-PYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGAD 222          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57
Identity = 111/219 (50.68%), Postives = 135/219 (61.64%), Query Frame = 1
Query:   43 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            +AFG AA+D SG LSPF+FSRR TG++DVR KVL+CGICHTDL+  KNEWG + +P+VPGHEI G VTE                     +C SC+SC +  ENYCPKMILT  + N D T+T GGYSDHMV  E +I+R PD++PLD AAPLLCAG+TVYSP+KY GL +                              ISTS  K+ EA+  LGAD
Sbjct:    8 EAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGAD 226          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54
Identity = 102/220 (46.36%), Postives = 133/220 (60.45%), Query Frame = 1
Query:   43 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLA-EQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            +AFGWAA D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT   GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+  E                              IS S  K+ EA++ LGAD
Sbjct:    6 RAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD 225          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53
Identity = 103/221 (46.61%), Postives = 133/221 (60.18%), Query Frame = 1
Query:   43 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTI-TFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLA-EQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            KAFGWAA D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT    GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+  E                              IS S  K+ EA++ LGAD
Sbjct:    6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD 226          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.987e-52
Identity = 100/206 (48.54%), Postives = 126/206 (61.17%), Query Frame = 1
Query:   82 LSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            LSPF FSRR TGD DVR KVLYCG+CH+DL  +KNEWG + +P+VPGHEI G VTE                     +C SCE+C +D EN C K + TY+  N DG+IT+GGY+D MVA++ +++R+P+++PLD+ APLLCAGIT YSPL+Y GL +                              ISTS SKK EALE LGAD
Sbjct:    2 LSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGAD 207          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.987e-52
Identity = 102/218 (46.79%), Postives = 126/218 (57.80%), Query Frame = 1
Query:   46 AFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            A GWAARD SG LSP+NFSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD +V NE Y++R P  +PLD AAPLLCAG+TVYSP+   GL                                ISTSP K+ EALEHLGAD
Sbjct:   83 AVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREALEHLGAD 300          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.390e-52
Identity = 104/221 (47.06%), Postives = 127/221 (57.47%), Query Frame = 1
Query:   46 AFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTD---GTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            A GWAARD SG LSP+NFSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C  CE C N  ENYC KM+ T + ++ D   G  T GG+SD +V NE Y++R P  +PLD+AAPLLCAG+TVYSP+   GL                                ISTSP K+ EALEHLGAD
Sbjct:   83 AVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRQEALEHLGAD 303          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.895e-51
Identity = 105/237 (44.30%), Postives = 135/237 (56.96%), Query Frame = 1
Query:   16 KSPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCP-KMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDS--------MPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            ++P      KA G AA D SGHL+P   SRR+TGD+DV +KVLYCGICH+DL  IKNEW  +++P+V GHEI G VTE                      C  CESC +  ENYC   ++ TY+S++ DGT T+GGYSD +V ++R++VRFP S        +PLD+ APLLCAG+TVY+P++  GL E                              ISTSP K+ EALE LGAD
Sbjct:   13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGAD 249          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 107/231 (46.32%), Postives = 136/231 (58.87%), Query Frame = 1
Query:   13 AKSPEEXXPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLD-AAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTS-PSKKTEALEHLGAD 699
            A   E   P KAFGWAARDSSG LSPFNFSRR+ G+EDV L+VLYCGICHTDL   KN++G S++P VPGHE+ G V E                     +C SC++C ++LENYCPK ILT    + DGT T+GGYSD MV +E ++ R P+ +PLD   +  LC G + +SPLKY+GL +                              ISTS P+KK EA+++LGAD
Sbjct:    3 ASQVEFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGAD 232          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 99/218 (45.41%), Postives = 127/218 (58.26%), Query Frame = 1
Query:   46 AFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGAD 699
            A GWAARD+SGHLSPF+F+RR   ++DV +KVLYCGICHTDL  IKNEWG +++P+VPGHEI G V                       +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y++R P S+P D AAPLLCAG+TVYSP+  +GL                                IS+SP+K+ EALE LGAD
Sbjct:    8 ALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKREEALERLGAD 225          
The following BLAST results are available for this feature:
BLAST of CK936745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
MTDH1_STYHU1.203e-5747.95Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH7_ARATH4.571e-5750.68Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH3_ARATH1.245e-5446.36Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH2_ARATH1.054e-5346.61Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH_PETCR1.987e-5248.54Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CAD8B_ORYSJ1.987e-5246.79Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8C_ORYSJ3.390e-5247.06Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CADH7_ORYSJ4.895e-5144.30Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
MTDH3_STYHU1.090e-5046.32Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CAD8A_ORYSJ1.090e-5045.41Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004518_F12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936745 ID=CK936745; Name=CK936745; organism=Citrus sinensis; type=EST; length=701bp
GCGGGGAAAATGGCAAAGTCACCAGAAGAAGNNNATCCAGTAAAGGCCTT
CGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCT
CCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGT
GGGATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTC
TCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAG
TTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGA
TGCATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGA
AAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACG
GAACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGC
TACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCT
GCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTAG
CAGAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTCAT
GTCGCTGTCAAATTTGCCAAGGCTTTTGGGGCCAAAGTGACAGTAATTAG
CACCTCTCCAAGCAAGAAGACTGAAGCTCTTGAACATCTTGGCGCTGATT
C
back to top