CK936745

Overview
NameCK936745
Unique NameCK936745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11
Identity = 43/139 (30.94%), Postives = 60/139 (43.17%), Query Frame = 1
Query:  124 DVRLKVLYCGICHTDLANIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 537
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP+  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK
Sbjct:   35 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLS-------GYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALK 166          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 42/139 (30.22%), Postives = 59/139 (42.45%), Query Frame = 1
Query:  124 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 537
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ C +  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK
Sbjct:   60 EILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADLS-------GYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALK 191          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 42/139 (30.22%), Postives = 57/139 (41.01%), Query Frame = 1
Query:  124 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 537
            ++ + V Y G+CHTDL   K +W      P+V GHE AG V                       +C +CE C    E+ CP   L+       G    G +  +  A+       P    L   AP+LCAG+TVY  LK
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALK 164          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 40/148 (27.03%), Postives = 64/148 (43.24%), Query Frame = 1
Query:  106 RETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 549
            RE    +  +K  YCG+CHTDL ++KN     +  +  GHE  G V E                     AC +CE C    E  C  ++         G    G  ++ ++ +  Y V+ P+++   AA+ + CAG+T Y  +K  G+
Sbjct:   20 RELKPGEALVKTEYCGVCHTDL-HVKNADFGDVTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL-------NAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGI 159          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 45/158 (28.48%), Postives = 65/158 (41.14%), Query Frame = 1
Query:   67 DSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 537
            +S+G L   +    +    ++ + V Y G+CHTDL     +W   +  P+V GHE AG V                       +C +CE C    E+ CP   L+       G    G + ++  A+       P    L   AP+LCAGITVY  LK
Sbjct:   14 ESNGKLEHKDIPVPKPKPNELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYTHDGSFQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALK 164          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 42/139 (30.22%), Postives = 59/139 (42.45%), Query Frame = 1
Query:  124 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 537
            ++ + V Y G+CHTDL   K +W  +   P+V GHE AG V                       +C +CE C +  E  C +  L+       G    G +  +  A+     R P    L   AP+LCAG+TVY  LK
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADLS-------GYTHDGSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALK 164          
BLAST of CK936745 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11
Identity = 44/144 (30.56%), Postives = 60/144 (41.67%), Query Frame = 1
Query:  124 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLA 552
            ++ + V Y G+CHTDL   K +W  +   P+V GHE AG V                       +C SCE C    E  C +  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK   LA
Sbjct:   35 ELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADLS-------GYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLA 171          
The following BLAST results are available for this feature:
BLAST of CK936745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
ADH1_KLULA2.223e-1130.94Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
ADH4_KLULA4.952e-1130.22Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH2_KLUMA4.952e-1130.22Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH_STAEQ8.446e-1127.03Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH2_YEAST8.446e-1128.48Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH2_CANAL8.446e-1130.22Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH1_CANAL8.446e-1130.56Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004518_F12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936745 ID=CK936745; Name=CK936745; organism=Citrus sinensis; type=EST; length=701bp
GCGGGGAAAATGGCAAAGTCACCAGAAGAAGNNNATCCAGTAAAGGCCTT
CGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCT
CCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGT
GGGATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTC
TCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAG
TTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGA
TGCATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGA
AAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACG
GAACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGC
TACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCT
GCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTAG
CAGAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTCAT
GTCGCTGTCAAATTTGCCAAGGCTTTTGGGGCCAAAGTGACAGTAATTAG
CACCTCTCCAAGCAAGAAGACTGAAGCTCTTGAACATCTTGGCGCTGATT
C
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