CK936734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_DROME (Thymidylate synthase OS=Drosophila melanogaster GN=Ts PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 8.066e-54 Identity = 98/151 (64.90%), Postives = 122/151 (80.79%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMAN--GELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I+ I+NNP+DRRI++SAWNP D+ MALPPCH A+FY++ GELSCQ+YQRSADMGLGVPFNIASYALLT MIAHV L PGDF+H +GD HVY NHV PL+EQL++ P+PFP L I + +DI+ F EDF+++ Y+PH KI+M MAV Sbjct: 171 IDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFYVSEKRGELSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLERTPRPFPKLIIKRQVQDIEDFRFEDFQIVDYNPHPKIQMDMAV 321
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_PNECA (Thymidylate synthase OS=Pneumocystis carinii GN=THYA PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.828e-53 Identity = 93/155 (60.00%), Postives = 120/155 (77.42%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMA------NGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I KI+ +P DRR++LSAWNP+DL+ MALPPCHMF +FY+ ELSCQ+YQRS DMGLGVPFNIASYALLTCMIAHVCDL PGDFIHV+GD H+Y++H+ L++QL + P+PFP L +N DI+ F +DF + Y P++ I+MKM++ Sbjct: 143 IQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHIEALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI 297
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_HHV8 (Thymidylate synthase OS=Human herpesvirus 8 GN=70 PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.426e-52 Identity = 90/149 (60.40%), Postives = 117/149 (78.52%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 ++ IKNNP+DRRI++ AWNP+DL LMALPPCH+ +FY+A+GELSCQ+YQRS DMGLGVPFNIASY+LLT M+AHV L PG+FIH +GDAH+Y+ H+ PL QL + P+PFP L+I ++ F +DF+L+ Y PH I M+MAV Sbjct: 189 VDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQLYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPLRLQLTRTPRPFPRLEILRSVSSMEEFTPDDFRLVDYCPHPTIRMEMAV 337
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: DRTS_PARTE (Bifunctional dihydrofolate reductase-thymidylate synthase OS=Paramecium tetraurelia GN=GSPATT00019973001 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.682e-51 Identity = 92/149 (61.74%), Postives = 119/149 (79.87%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I +KNNP+ RRI+LSAWNP DLK MALPPCH+ ++F++ANG+LSC MYQRS D GLG+PFNIASYALLT M+A C+L G+F+HV+GD H+Y NHV L++Q++++P PFP+LKI K D + EDF+L+GY+ H KIEMKMAV Sbjct: 315 IQLLKNNPDSRRIILSAWNPIDLKQMALPPCHVMSQFFVANGKLSCMMYQRSCDFGLGIPFNIASYALLTYMLAKECNLNLGEFVHVLGDTHIYSNHVEALKKQIERVPYPFPLLKIKGNKSLFD-YTYEDFELVGYNAHDKIEMKMAV 462
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BOVIN (Thymidylate synthase OS=Bos taurus GN=TYMS PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.424e-50 Identity = 100/187 (53.48%), Postives = 121/187 (64.71%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQ--------------------------------------LQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I+ IK NPNDRRI+L AWNP DL LMALPPCH +FY+ NGELSCQ+YQRS DMGLGVPFNIASYALLT MIAH+ DL PGDF+H +GDAH+Y NH+ PL+ Q LQ+ P+PFP LKI + + ID F AEDF++ GY+P+ I+M+MAV Sbjct: 168 IDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLKPGDFVHTLGDAHIYLNHIEPLKTQALMELRGQSSRSLDGDGQAGTSRWAPVATDTERDRCCELQREPRPFPKLKILRKVETIDDFQAEDFQIEGYNPNPTIKMEMAV 354
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_HSVAT (Thymidylate synthase OS=Herpesvirus ateles GN=TS PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.228e-50 Identity = 92/149 (61.74%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 IN I NP DRR+++ AWN D+ MALPPCH+ ++FY+ +G+LSCQ+YQRSADMGLGVPFNIASY+LLTCMIAHV DL PG+FIH +GDAHVY NHV L EQL + P+PFP LK + ID F A D L Y+P+ I+M MAV Sbjct: 142 INTIHTNPTDRRMLMCAWNVLDVPKMALPPCHVLSQFYVCDGKLSCQLYQRSADMGLGVPFNIASYSLLTCMIAHVTDLVPGEFIHTLGDAHVYVNHVDALTEQLTRTPRPFPTLKFARKVASIDDFKANDIILENYNPYPSIKMPMAV 290
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_YEAST (Thymidylate synthase OS=Saccharomyces cerevisiae GN=TMP1 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.574e-49 Identity = 93/158 (58.86%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMA---NGE------LSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I+K+K NP DRRI++SAWNP+D MALPPCH+F++FY++ GE LSC +YQRS DMGLGVPFNIASYALLT MIA V D+ PG+FIH +GDAHVY++H+ L+EQ+ + P+PFP LKI + KDID F DF++ Y+PH +I+MKM+V Sbjct: 147 IHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFPKEGEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDMEPGEFIHTLGDAHVYKDHIDALKEQITRNPRPFPKLKIKRDVKDIDDFKLTDFEIEDYNPHPRIQMKMSV 304
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_VZVO (Thymidylate synthase OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF13 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.580e-49 Identity = 88/149 (59.06%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I+ IK NP RR+++S+WNP D+ LM LPPCH +FY+ANGELSCQ+YQRS DMGLGVPFNIA YALLT ++AHV L GD IH +GDAH+Y NH+ L+ QL + PKPFP LKI DI+ F +DF+L GY+PH ++M+MA+ Sbjct: 153 IDTIKTNPESRRMIISSWNPKDIPLMVLPPCHTLCQFYVANGELSCQVYQRSGDMGLGVPFNIAGYALLTYIVAHVTGLKTGDLIHTMGDAHIYLNHIDALKVQLARSPKPFPCLKIIRNVTDINDFKWDDFQLDGYNPHPPLKMEMAL 301
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_VZVD (Thymidylate synthase OS=Varicella-zoster virus (strain Dumas) GN=ORF13 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.580e-49 Identity = 88/149 (59.06%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I+ IK NP RR+++S+WNP D+ LM LPPCH +FY+ANGELSCQ+YQRS DMGLGVPFNIA YALLT ++AHV L GD IH +GDAH+Y NH+ L+ QL + PKPFP LKI DI+ F +DF+L GY+PH ++M+MA+ Sbjct: 153 IDTIKTNPESRRMIISSWNPKDIPLMVLPPCHTLCQFYVANGELSCQVYQRSGDMGLGVPFNIAGYALLTYIVAHVTGLKTGDLIHTMGDAHIYLNHIDALKVQLARSPKPFPCLKIIRNVTDINDFKWDDFQLDGYNPHPPLKMEMAL 301
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_CHRVO (Thymidylate synthase OS=Chromobacterium violaceum GN=thyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 87/149 (58.39%), Postives = 114/149 (76.51%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 ++ IK NP+ RR+++SAWNP+ + MALPPCH +FY+ANG LSCQ+YQRSAD+ LGVPFNIASYALLT M+A VC L PGDF+H +GDAH+Y NH+ QL + P+P P +K+NPE KD+ +F +DF L GYDPH I+ ++AV Sbjct: 116 LDMIKKNPDSRRLIVSAWNPALVDQMALPPCHSLFQFYVANGRLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVCGLQPGDFVHTLGDAHLYSNHLEQARLQLTRDPRPLPTMKLNPEVKDLFAFTFDDFALEGYDPHPHIKAQVAV 264 The following BLAST results are available for this feature:
BLAST of CK936734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936734 ID=CK936734; Name=CK936734; organism=Citrus sinensis; type=EST; length=820bpback to top |