CK936734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_CANAL (Thymidylate synthase OS=Candida albicans GN=TMP1 PE=3 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.247e-46 Identity = 92/170 (54.12%), Postives = 118/170 (69.41%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYM-----------------ANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKD----IDSFVAEDFKLIGYDPHQKIEMKMAV 450 I K+K NP DRRI++SAWNP D MALPPCH+F +FY+ A +LSC +YQRS DMGLGVPFNIASYALLT MIAHV D+ G+FIH +GDAHVY +H+ L+EQ +++PK FP L I E+K+ ID F EDF+++GY+P+ I+MKM+V Sbjct: 146 IKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFYVNFPTSSPDPNNPKQAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDMDCGEFIHTLGDAHVYLDHIDALKEQFERIPKQFPKLVIKEERKNEIKSIDDFKFEDFEIVGYEPYPPIKMKMSV 315
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BRASB (Thymidylate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=thyA PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.629e-46 Identity = 84/149 (56.38%), Postives = 111/149 (74.50%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I+ IK NP+ RR++++AWNP+D++ MALPPCH +FY+ NG+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PG+F+H GD H+Y NHV QL + P+ P + +NP+ KDI +F EDF L GYDPH I+ ++AV Sbjct: 116 IDMIKRNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVVNGKLSCQLYQRSADVFLGVPFNIASYALLTMMVAQVTGLKPGEFVHSFGDVHLYSNHVEQARLQLTRAPRSLPTMTLNPDVKDIFAFRYEDFALAGYDPHPHIKAEVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_RHOP2 (Thymidylate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=thyA PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.127e-46 Identity = 85/149 (57.05%), Postives = 110/149 (73.83%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 ++ I+ NP+ RR++++AWNP+D++ MALPPCH +FY+ANG LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PGDFIH +GDAH+Y NH+ QL + P+ P + INP DI F EDF L GYDPH I+ ++AV Sbjct: 116 VDMIRRNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGRLSCQLYQRSADVFLGVPFNIASYALLTMMVAQVTGLKPGDFIHTLGDAHLYSNHLEQARLQLTRAPRALPAMAINPAVTDIFGFRYEDFTLHGYDPHPHIKAEVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BRASO (Thymidylate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=thyA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.779e-46 Identity = 82/149 (55.03%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 ++ I+ NP+ RR++++AWNP+D++ MALPPCH +FY+ANG+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L G+F+H GD H+Y NH+ QL + P+P P + +NP+ KDI +F EDF L GYDPH I+ ++AV Sbjct: 116 VDMIRRNPDSRRLIVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIASYALLTMMVAQVTGLKLGEFVHSFGDVHLYSNHIEQARLQLSRTPRPLPTMTLNPDVKDIFAFRYEDFALAGYDPHPHIKAEVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: DRTS_TRYCR (Bifunctional dihydrofolate reductase-thymidylate synthase OS=Trypanosoma cruzi PE=1 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 2.779e-46 Identity = 83/149 (55.70%), Postives = 110/149 (73.83%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 + +K NP+DRR++ +AWNPS L MALPPCH+ A+FY++NGELSC +YQRS DMGLGVPFNIASYALLT +IA L PG+ +H +GDAHVY NHV P EQL+++P+ FP L E++ ++ + D ++I Y P+ I MKMAV Sbjct: 373 VETLKTNPDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQLKRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_RHIEC (Thymidylate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=thyA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.739e-46 Identity = 85/149 (57.05%), Postives = 110/149 (73.83%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 + I NNPN RR ++SAWNP+++ MALPPCH +FY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L GDF+H +GDAH+Y NH + QL + PKP P ++INPE KDI F +DF+LIGY+ I+ +AV Sbjct: 116 VKGIVNNPNSRRHIVSAWNPAEVDQMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTMMVAQVTGLKGGDFVHTLGDAHLYHNHFDQAKLQLTRRPKPLPFMRINPEVKDIFGFTFDDFELIGYEADASIKAPIAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_PSEMY (Thymidylate synthase OS=Pseudomonas mendocina (strain ymp) GN=thyA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.739e-46 Identity = 84/149 (56.38%), Postives = 113/149 (75.84%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I I+ NP+ RR+++SAWNP+ ++ MALPPCH +FY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A VCDL PG+FI GD H+Y NH+ + QL + P P P +K+NPE KD+ +F EDF+L+GY+ H I+ +AV Sbjct: 116 IEMIRKNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLLAFRFEDFELVGYEAHPHIKAPVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BREBN (Thymidylate synthase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=thyA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.190e-46 Identity = 84/149 (56.38%), Postives = 113/149 (75.84%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I++IK NP+ RR+++SAWNP++L MALPPCH+ +FY+ANG+LSCQ+YQRS D LGVPFNIASYALLT M+AHV L GDF+H IGDAH+Y NH+ ++ QL + PKP P L +NP+ I F ED +++GY+ H I+ ++AV Sbjct: 116 IDEIKRNPDSRRLIVSAWNPAELDKMALPPCHLLFQFYVANGKLSCQLYQRSGDTFLGVPFNIASYALLTHMVAHVTGLEVGDFVHTIGDAHLYLNHIEQVKLQLTREPKPLPKLVLNPDVTSIFDFKYEDIEIVGYESHPHIKGEVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BACHK (Thymidylate synthase OS=Bacillus thuringiensis subsp. konkukian GN=thyA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.190e-46 Identity = 82/149 (55.03%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I IK P+ RR+++SAWNP D+ MALPPCH +FY+A+G+LSCQ+YQRS D+ LG+PFNIASY+LLT +IAH C L G+F+H IGDAH+Y NH +E+QL + P+PFP L +NP+ K + F ED + GYDPH I+ +AV Sbjct: 170 IEMIKKTPDSRRLIVSAWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV 318
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BACCZ (Thymidylate synthase OS=Bacillus cereus (strain ZK / E33L) GN=thyA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.190e-46 Identity = 82/149 (55.03%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I IK P+ RR+++SAWNP D+ MALPPCH +FY+A+G+LSCQ+YQRS D+ LG+PFNIASY+LLT +IAH C L G+F+H IGDAH+Y NH +E+QL + P+PFP L +NP+ K + F ED + GYDPH I+ +AV Sbjct: 170 IEMIKKTPDSRRLIVSAWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV 318 The following BLAST results are available for this feature:
BLAST of CK936734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936734 ID=CK936734; Name=CK936734; organism=Citrus sinensis; type=EST; length=820bpback to top |