CK936734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_LACCA (Thymidylate synthase OS=Lactobacillus casei GN=thyA PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.240e-45 Identity = 82/149 (55.03%), Postives = 111/149 (74.50%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I +IK +P RR+++SAWNP D+ MALPPCH +FY+ +G+LS Q+YQRSAD+ LGVPFNIASYALLT ++AH C L G+FIH GDAH+Y NH+ ++EQL + P+P P L++NP+K DI F +D KL+ YDP+ I+ +AV Sbjct: 168 IEQIKTHPYSRRLIVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYDPYPAIKAPVAV 316
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_ENTFA (Thymidylate synthase OS=Enterococcus faecalis GN=thyA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.240e-45 Identity = 83/149 (55.70%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I IK NP+ RR+++SAWNP D+ MALPPCH +FY+ G+LSCQ+YQRSAD+ LGVPFNIASYALLT +IAH L G+F+H +GDAH+Y+NHV ++EQL + + FP L +NP+K + F ED K+ GYDPH I+ +AV Sbjct: 167 IEMIKTNPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIAHETGLEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKVEGYDPHPTIKAPIAV 315
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_CRYNE (Thymidylate synthase OS=Cryptococcus neoformans GN=TMP1 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.240e-45 Identity = 94/160 (58.75%), Postives = 114/160 (71.25%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMA---------NGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKK---DIDSFVAEDFKLIGYDPHQKIEMKMA 447 I+ IKNNP DRRI+LSAWNP DL LMALPPCHMF +F+++ +LSC MYQRS D+GLGVPFNIASYALLT MIA + D P +FI +GDAHVYR+HV PL+ QL++ P+ FP LK K+ DID F EDF + GY P KI+MKM+ Sbjct: 157 IDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFFVSLPPADSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYRDHVEPLKTQLEREPRDFPKLKWARSKEEIGDIDGFKVEDFVVEGYKPWGKIDMKMS 316
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_CLOCE (Thymidylate synthase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=thyA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.938e-45 Identity = 81/149 (54.36%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I++IKNNP+ RR+++S+WN +++ MALPPCH F +FY+ NG LSC +YQRSAD+ +GVPFNIASYAL T MIA C L G+F+H +GDAH+Y NHV ++ QL + P+P P + INP+ KD+ F DF L YDPH I+ +AV Sbjct: 116 IDQIKNNPDSRRLIVSSWNVGEIEKMALPPCHCFYQFYVVNGTLSCMLYQRSADVFIGVPFNIASYALFTMMIAQSCGLRAGEFVHTLGDAHIYLNHVEQVKLQLSRDPRPLPKMNINPDIKDLFQFKYSDFTLTDYDPHPHIKGAVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_CHRSD (Thymidylate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=thyA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.938e-45 Identity = 81/149 (54.36%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 + +IK NP+ RR+++SAWNP+ + MALPPCH +FY+A G LSCQ+YQRSAD+ LGVPFNIASYALLT M+A CDLAPG+F+H +GDAH+Y NH+ QL + P+ P L +NP KD+ +F +D + YDPH I+ ++AV Sbjct: 116 VEQIKRNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVAEGRLSCQLYQRSADIFLGVPFNIASYALLTHMVAQACDLAPGEFVHTLGDAHLYLNHLEQARLQLSREPRALPRLVLNPRVKDVFAFTFDDIAIEDYDPHPHIKAEVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BACV8 (Thymidylate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=thyA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.938e-45 Identity = 86/149 (57.72%), Postives = 109/149 (73.15%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I IK+NP+ RRI++SAWN +DL M LPPCH F +FY+ANG LS Q+YQRSAD LGVPFNIASYALL M+A V L GDF+H +GD H+Y NH+ ++ QL + P+P P +KINP+ KDI SF EDF+L+ YDP I K++V Sbjct: 116 IETIKHNPDSRRIIVSAWNVADLNNMNLPPCHAFFQFYVANGRLSLQLYQRSADTFLGVPFNIASYALLLQMVAQVTGLQTGDFVHTLGDTHIYTNHLEQVKLQLSREPRPLPQMKINPDIKDIFSFKYEDFELVNYDPWPHIAGKVSV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BACHD (Thymidylate synthase OS=Bacillus halodurans GN=thyA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.938e-45 Identity = 78/149 (52.35%), Postives = 114/149 (76.51%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 + IK+ P+ RR+++SAWN ++++ MAL PCH +FY+ +G+LSCQ+YQRSAD+ LGVPFNIASYALLT MIA VCDL G+F+H GDAH+Y NH+ ++ QL + P+P P +++NPE + + F +DF+L+GYDPH I+ +++V Sbjct: 116 VEAIKHQPDSRRLIVSAWNAAEIEDMALAPCHCLFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTKMIAQVCDLEEGEFVHTFGDAHIYLNHIEQVKLQLTREPRPLPEMRLNPEVRSLFDFTFDDFELVGYDPHPHIKGEVSV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_FLAJ1 (Thymidylate synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=thyA PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.167e-44 Identity = 92/171 (53.80%), Postives = 113/171 (66.08%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDL-------------KLMALPPCHMFARFYMAN---------GELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 I ++K NPN RR+++SAWNPS L ALPPCH F +FY+A+ G+LSCQ+YQRSAD+ LGVPFNIASYALLT MIA VCDL PG+FIH GDAH+Y NH LE QL + PKP P + +NPE K+I F +DF L+ YDPH I+ +AV Sbjct: 113 ITELKTNPNSRRMIVSAWNPSVLPDTKKSFEENVANNKAALPPCHAFFQFYVASPDLEKGETKGKLSCQLYQRSADIFLGVPFNIASYALLTMMIAQVCDLEPGEFIHTFGDAHIYNNHFEQLELQLSREPKPLPKMILNPEIKNIFDFDYDDFTLVDYDPHPAIQGSVAV 283
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_XYLFA (Thymidylate synthase OS=Xylella fastidiosa GN=thyA PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.991e-44 Identity = 83/149 (55.70%), Postives = 110/149 (73.83%), Query Frame = 1 Query: 4 INKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 + +IK NP+ RR+V+SAWN +DL MAL PCH +FY+ANG+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V LA GDF+H +GDAH+Y NHV QL+++P+P P+L +NP D+ F +D + GYDP+ I+ +AV Sbjct: 116 LEEIKRNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIASYALLTHMLAQVTGLAVGDFVHTLGDAHLYANHVEQASVQLERVPRPQPVLMLNPAVTDLFDFTYDDIVIEGYDPYPAIKAPVAV 264
BLAST of CK936734 vs. ExPASy Swiss-Prot
Match: TYSY_BARHE (Thymidylate synthase OS=Bartonella henselae GN=thyA PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.991e-44 Identity = 82/146 (56.16%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 13 IKNNPNDRRIVLSAWNPSDLKLMALPPCHMFARFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVGPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 450 IK P+ RR+++SAWNP+ +K MALPPCH F +FY+A+G+LSCQ+YQRSAD+ LG+PFNIASYALLT MIA V L GDFIH +GDAH+Y NH + QL ++P P ++INP D+ SF EDF+L+ YD I+ +AV Sbjct: 119 IKKTPDSRRLIVSAWNPASIKEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGIPFNIASYALLTMMIAQVSGLKVGDFIHTLGDAHLYSNHFEQAQHQLSRIPNALPFMRINPAVTDLFSFKFEDFELLNYDAQPHIKAPIAV 264 The following BLAST results are available for this feature:
BLAST of CK936734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936734 ID=CK936734; Name=CK936734; organism=Citrus sinensis; type=EST; length=820bpback to top |