CX675175

Overview
NameCX675175
Unique NameCX675175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.090e-62
Identity = 113/223 (50.67%), Postives = 161/223 (72.20%), Query Frame = -1
Query:  226 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 894
            HACAHNPTG DPT EQW+QI  +M+ + L PFFDSAYQGFASG+L+ DA ++R FV++G E   AQS++KN GLY ERVG L++V K  +   RV SQ++ ++R  +S+PP  GA IVA  L +  +++EW   +K MADRI++MR +L   L A  TPG W+HI  QIGMF++TGLN +QV ++  E HIY+   GRI+++GL++K + ++  +IH A+T++
Sbjct:  190 HACAHNPTGTDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPESILRVLSQMEKIVRITWSNPPAQGARIVADTLSNPELFEEWKGNVKTMADRILTMRSELRARLEALKTPGTWNHITDQIGMFSYTGLNPKQVEYLINEKHIYLLPSGRINVSGLTTKNLDYVATSIHEAITKI 412          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATC_SCHPO (Aspartate aminotransferase, cytoplasmic OS=Schizosaccharomyces pombe GN=aat2 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.241e-57
Identity = 111/223 (49.78%), Postives = 146/223 (65.47%), Query Frame = -1
Query:  226 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVTRM 894
            HACAHNPTG+DPT EQW  I + + S+  L  FD AYQGFASG L+ D+ ++  FV    +  V QS+AKNMGLYGER G +  V K     ++V SQL +V R   S+PP +GA I A IL    ++ EW  +LK M+ RII MR++L D+L A  TPG W HI +QIGMF+FTGL   QV F  + YH+Y +++GRISMAGL++  V H+  A + AV  +
Sbjct:  186 HACAHNPTGIDPTREQWLSIFESLLSRKHLVVFDIAYQGFASGDLNRDSWALNEFVKYNKDFFVCQSFAKNMGLYGERTGCMHYVAKDASTKNKVLSQLCIVQRNTISNPPAYGARIAAEILNSPQLFAEWEQDLKTMSSRIIEMRKRLRDSLVALKTPGSWDHITQQIGMFSFTGLTPAQVQFCQERYHLYFSANGRISMAGLNNSNVEHVAQAFNHAVREL 408          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATC_CAEEL (Probable aspartate aminotransferase, cytoplasmic OS=Caenorhabditis elegans GN=T01C8.5 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.407e-55
Identity = 105/220 (47.73%), Postives = 144/220 (65.45%), Query Frame = -1
Query:  235 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 894
            H CAHNPTG+DPT EQW+ + ++++ K L  FFD AYQGFASG   ADA ++R FV  G E +V+QS+AKN GLY ERVG L++V     V +  +SQ+ LVIR  +S+PP HGA IV  +L      ++W   ++AM+ RI  MR  L   L   GTPG W HII+QIGMF++TGL S QV  +   + +++  DGRI++ GL++K V ++  AI   V
Sbjct:  182 HGCAHNPTGMDPTQEQWKLVAEVIKRKNLFTFFDIAYQGFASGDPAADAWAIRYFVDQGMEMVVSQSFAKNFGLYNERVGNLTVVVNNPAVIAGFQSQMSLVIRANWSNPPAHGARIVHKVLTTPARREQWNQSIQAMSSRIKQMRAALLRHLMDLGTPGTWDHIIQQIGMFSYTGLTSAQVDHLIANHKVFLLRDGRINICGLNTKNVEYVAKAIDETV 401          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AATM_SCHPO (Aspartate aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=aat1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.153e-54
Identity = 103/222 (46.40%), Postives = 145/222 (65.32%), Query Frame = -1
Query:  232 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSA-RGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAVT 894
            HACAHNPTGVDPT  QW+ I + M+ K      D AYQGFASG    DA + R+F +     L+ QS+AKNMGLYGER G  SI+    + A+R+ESQ K++IR +YS+PP++GA I   IL +  + ++W  E+  M++R+ SMR+ L + L         W HI  QIGMF +TGLN +QV  + K+YHIY+T +GRIS++GL++  V +  +AI+A  +
Sbjct:  215 HACAHNPTGVDPTKAQWDDILKTMQKKNHFALLDMAYQGFASGDFARDAYATRLFASSNVPMLLCQSFAKNMGLYGERAGCFSILANDAEEAARIESQTKILIRALYSNPPVNGARIANHILSNPALREQWAGEVVGMSERLKSMRKALRNILEKDLKNKHSWKHITDQIGMFCYTGLNPQQVDVLAKQYHIYLTKNGRISISGLNTSNVRYFAEAINAVTS 436          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT_ECOLI (Aspartate aminotransferase OS=Escherichia coli (strain K12) GN=aspC PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.997e-53
Identity = 106/220 (48.18%), Postives = 140/220 (63.64%), Query Frame = -1
Query:  235 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 894
            H C HNPTG+DPTLEQW+ + QL   KG LP FD AYQGFA G L+ DA+ +R F A   E +VA SY+KN GLY ERVGA ++V    +   R  SQ+K  IR  YS+PP HGAS+VATIL +  +   W  EL  M  RI  MRQ   + L  +G   D+S IIKQ GMF+F+GL  EQV  + +E+ +Y  + GR+++AG++   +  L +AI A +
Sbjct:  178 HGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT_SALTY (Aspartate aminotransferase OS=Salmonella typhimurium GN=aspC PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52
Identity = 105/220 (47.73%), Postives = 140/220 (63.64%), Query Frame = -1
Query:  235 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 894
            H C HNPTG+DPTLEQW+ + +L   KG LP FD AYQGFA G L+ DA+ +R F A   E +VA SY+KN GLY ERVGA ++V    +   R  SQ+K  IR  YS+PP HGASIVATIL +  +   W  EL  M  RI  MRQ   + L  +G   D+S IIKQ GMF+F+GL  +QV  + +E+ +Y  + GR+++AG++   +  L +AI A +
Sbjct:  178 HGCCHNPTGIDPTLEQWQVLAELSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAALHKELIVASSYSKNFGLYNERVGACTLVAADAETVDRAFSQMKSAIRANYSNPPAHGASIVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKDQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT_SALTI (Aspartate aminotransferase OS=Salmonella typhi GN=aspC PE=3 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52
Identity = 105/220 (47.73%), Postives = 140/220 (63.64%), Query Frame = -1
Query:  235 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 894
            H C HNPTG+DPTLEQW+ + +L   KG LP FD AYQGFA G L+ DA+ +R F A   E +VA SY+KN GLY ERVGA ++V    +   R  SQ+K  IR  YS+PP HGASIVATIL +  +   W  EL  M  RI  MRQ   + L  +G   D+S IIKQ GMF+F+GL  +QV  + +E+ +Y  + GR+++AG++   +  L +AI A +
Sbjct:  178 HGCCHNPTGIDPTLEQWQVLAELSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAALHKELIVASSYSKNFGLYNERVGACTLVAADAETVDRAFSQMKSAIRANYSNPPAHGASIVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKDQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT_HAEIN (Aspartate aminotransferase OS=Haemophilus influenzae GN=aspC PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.638e-50
Identity = 99/216 (45.83%), Postives = 138/216 (63.89%), Query Frame = -1
Query:  247 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAI 894
            H C HNPTG+DPT EQW+++  L    G LP FD AYQG A+G LD DA  +R F A+  E LVA S++KN GLY ERVGA ++V +  ++AS   +Q+K +IR +YS+P  HG + VAT+L D+ + +EW  EL  M +RI  MR      L   G   D+S II+Q GMF+F+GL  EQV  +  E+ IY    GRI++AG++   + +L ++I
Sbjct:  178 HGCCHNPTGIDPTPEQWQELAALSAKNGWLPLFDFAYQGLANG-LDEDAYGLRAFAANHKELLVASSFSKNFGLYNERVGAFTLVAENAEIASTSLTQVKSIIRTLYSNPASHGGATVATVLNDAQLRQEWENELTEMRERIKKMRHLFVQLLKEYGAEQDFSFIIEQNGMFSFSGLTGEQVDRLKNEFAIYAVRSGRINVAGITEDNIRYLCESI 392          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: AAT_PSEAE (Aspartate aminotransferase OS=Pseudomonas aeruginosa GN=aspC PE=3 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 4.022e-49
Identity = 98/216 (45.37%), Postives = 143/216 (66.20%), Query Frame = -1
Query:  247 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAI 894
            HAC HNPTGVD  L+ W+Q+  ++++KG +PF D AYQGF +G ++ DA +VR+F   G    V+ S++K+  LYGERVGALSIV ++ D ++RV SQ+K VIR  YS+PP HGAS+V+++L    +   W  EL  M DRI  MR  + + L+A G   D+S + +Q GMF+++GL ++QV  +  E+ IY  S GRI +A L+   +  +T AI
Sbjct:  180 HACCHNPTGVDLELDDWKQVLDVLKAKGHVPFLDIAYQGFGNG-IEEDAAAVRLFAQSGLSFFVSSSFSKSFSLYGERVGALSIVTESRDESARVLSQVKRVIRTNYSNPPTHGASVVSSVLNSPELRALWEQELGEMRDRIRDMRLAMVEQLAAHGAKRDFSFVGRQRGMFSYSGLTADQVERLKTEFGIYAVSTGRICVAALNKSNLETITKAI 394          
BLAST of CX675175 vs. ExPASy Swiss-Prot
Match: TYRB_SALTY (Aromatic-amino-acid aminotransferase OS=Salmonella typhimurium GN=tyrB PE=3 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.996e-48
Identity = 94/220 (42.73%), Postives = 142/220 (64.55%), Query Frame = -1
Query:  235 HACAHNPTGVDPTLEQWEQIRQLMRSKGLLPFFDSAYQGFASGSLDADAQSVRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKTEDVASRVESQLKLVIRPMYSSPPIHGASIVATILKDSTMYKEWTLELKAMADRIISMRQQLFDALSARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKTVPHLTDAIHAAV 894
            H C HNPTG D T  QW+ + ++++++ L+PF D AYQGF +G +D DA  +R   + G   LV+ S++K   LYGERVG LS+VC+  ++A+RV  QLK  +R +YSSPP  GA +VAT+L D  +   W  E+ AM +RIISMRQ L   L A     ++ ++++Q GMF++TGL+ EQV  +  E+ +Y+ + GR+ +AGL++  V  +  A  A +
Sbjct:  179 HPCCHNPTGADLTPSQWDAVIEIVKARDLIPFLDIAYQGFGAG-MDDDAYVIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVVCEDAEIAARVLGQLKATVRRIYSSPPCFGAQVVATVLGDEALKAGWLAEVDAMRNRIISMRQTLVKELKAEMPDRNFDYLLQQRGMFSYTGLSEEQVDRLRDEFGVYLIASGRMCVAGLNASNVHRVAKAFAAVM 397          
The following BLAST results are available for this feature:
BLAST of CX675175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AATC_MACFA1.090e-6250.67Aspartate aminotransferase, cytoplasmic OS=Macaca ... [more]
AATC_SCHPO5.241e-5749.78Aspartate aminotransferase, cytoplasmic OS=Schizos... [more]
AATC_CAEEL6.407e-5547.73Probable aspartate aminotransferase, cytoplasmic O... [more]
AATM_SCHPO4.153e-5446.40Aspartate aminotransferase, mitochondrial OS=Schiz... [more]
AAT_ECOLI5.997e-5348.18Aspartate aminotransferase OS=Escherichia coli (st... [more]
AAT_SALTY6.630e-5247.73Aspartate aminotransferase OS=Salmonella typhimuri... [more]
AAT_SALTI6.630e-5247.73Aspartate aminotransferase OS=Salmonella typhi GN=... [more]
AAT_HAEIN3.638e-5045.83Aspartate aminotransferase OS=Haemophilus influenz... [more]
AAT_PSEAE4.022e-4945.37Aspartate aminotransferase OS=Pseudomonas aerugino... [more]
TYRB_SALTY1.996e-4842.73Aromatic-amino-acid aminotransferase OS=Salmonella... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60D02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60D02-G4-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675175 ID=CX675175; Name=CX675175; organism=Citrus sinensis; type=EST; length=894bp
TTTTTTTTAACATCGCAACTTTCGTTTTTCTTCTACTTAATAAACATGTC
AAGTTTTGGTGGAAAGACAAGAATACAACACCAAAACCAAAAGAACAAAA
TTTTCTTAATGTAAAACCTTTATTTATGCATTTTCTAGTTCTACAAACTC
ATTTTTGCATTGCTGAGGGTGACTGAAAACCAAACAATTCTTACGGCATG
AATTCTTGTCTGATTAATCTTAGCCCATTCGGGTTACAGCAGCATGTATA
GCATCGGTAAGATGAGGAACTGTCTTTGAACTAAGACCTGCCATGCTAAT
CCTCCCATCAGATGTCATATAAATGTGATACTCCTTGGTCATGAAGGCAA
CTTGTTCACTGTTCAGCCCTGTGAATGTAAACATTCCTATTTGCTTGATA
ATGTGACTCCAGTCTCCTGGAGTGCCTCTAGCAGACAGAGCATCAAATAG
TTGCTGACGCATGCTTATAATCCGGTCAGCCATCGCTTTCAGTTCAAGAG
TCCACTCTTTATACATAGTGCTGTCCTTGAGAATTGTAGCCACAATAGAG
GCCCCGTGAATAGGTGGACTAGAGTACATGGGCCTAATCACGAGTTTCAA
CTGGCTTTCAACCCTGCTTGCCACATCTTCTGTCTTGCAGACAATGCTGA
GGGCGCCGACACGTTCCCCATAGAGTCCCATGTTTTTCGCATAACTCTGA
GCTACCAGGCATTCGCCACCATCTGCCACAAACATGCGAACAGATTGTGC
ATCTGCATCTAGGCTACCACTTGCAAAACCCTGATAAGCACTGTCAAAGA
AAGGTAACAATCCTTTTGACCTCATCAGCTGCCTGATCTGCTCCCACTGC
TCAAGGGTCGGGTCAACACCAGTTGGATTATGAGCACATGCATG
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