CK936592

Overview
NameCK936592
Unique NameCK936592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length402
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_XANCB (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 40/132 (30.30%), Postives = 54/132 (40.91%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            G+ LL WP  W + +AA  G  P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  +       L    SYP +KR T  PQ YLG+ F WG
Sbjct:   35 GSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVLSLNWLTVALSVPGLFLAASYPYLKRHTHLPQVYLGMAFGWG 164          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_XANC8 (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 40/132 (30.30%), Postives = 54/132 (40.91%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            G+ LL WP  W + +AA  G  P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  +       L    SYP +KR T  PQ YLG+ F WG
Sbjct:   35 GSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVLSLNWLTVALSVPGLFLAASYPYLKRHTHLPQVYLGMAFGWG 164          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_RALEJ (4-hydroxybenzoate octaprenyltransferase OS=Ralstonia eutropha (strain JMP134) GN=ubiA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 39/132 (29.55%), Postives = 56/132 (42.42%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            GT LL WP +W + MAA  G  P   +               C +ND  DRD D  V+RT+ RP+ +G +                       N+ ++     + +   +YP  KRF   PQAYLG+ F +G
Sbjct:   19 GTLLLLWPTLWALWMAA--GGPPALSVFCIFFAGTFLMRSAGCAINDYADRDFDKHVKRTKERPLTAGKIAAWEAVLIAAVLALIAFALILPLNSLTKWLAVVAAVVAGTYPFFKRFFAIPQAYLGIAFGFG 148          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_POLNS (4-hydroxybenzoate octaprenyltransferase OS=Polynucleobacter necessarius (strain STIR1) GN=ubiA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 39/132 (29.55%), Postives = 56/132 (42.42%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            GT LL WP +W + +A+      D  ++              C +ND  DRD D  V+RT+ RP+ SG ++                      N F++     +LL  F YP  KRF   PQ  LG+ F +G
Sbjct:   21 GTLLLLWPTLWALWLAS--SGVLDLSILLIFVAGTFLMRSAGCAINDYADRDFDRHVKRTQGRPVTSGKISAKEAVAVASFLALCAFLLIQPLNAFTKQLSVLALLVAFIYPFTKRFFAMPQTVLGIAFGFG 150          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_NEIG1 (4-hydroxybenzoate octaprenyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=ubiA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.608e-11
Identity = 39/132 (29.55%), Postives = 53/132 (40.15%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            GT LL WP  W + +A+     PD  ++              C +ND  DRD D  VERT+ RP A G +                       N+ + +    +L    +YP  KRF   PQ YLG  F +G
Sbjct:   29 GTLLLLWPTYWALWLASDG--IPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEALLLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQFYLGFAFSFG 158          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_PSEFS (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=ubiA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.406e-11
Identity = 37/132 (28.03%), Postives = 53/132 (40.15%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            G +LL WP +W + +A      P    +              C +ND  DR +D  V+RT  RP+ SG ++                      N  + +     L    SYP MKR+T++PQ  LG  F WG
Sbjct:   30 GIYLLLWPTLWALWIAGKGS--PSLINIVIFVLGVVLTRAGGCVINDWADRKVDGHVKRTEQRPLVSGKISSKEALVFFAVLMGISFLLVLLTNATTILLSLGGLALAASYPFMKRYTYYPQVVLGAAFSWG 159          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_AERS4 (4-hydroxybenzoate octaprenyltransferase OS=Aeromonas salmonicida (strain A449) GN=ubiA PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.406e-11
Identity = 39/131 (29.77%), Postives = 54/131 (41.22%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            GT LL WP +W + +AA  G  PD   +              C +ND  DR+ D  V+RT  RP+  G + P                     N+ +     ++LL    YP MKR+   PQ  LG+ F W
Sbjct:   23 GTLLLLWPTLWALWLAA--GGLPDLWTLLVFVVGVFLMRSAGCVINDYADRNFDGHVKRTAGRPLPMGKVKPREVLALFAVLALISFALVLTMNSLTIALSFAALLLAVCYPFMKRYIPIPQLVLGMAFSW 151          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_SHIFL (4-hydroxybenzoate octaprenyltransferase OS=Shigella flexneri GN=ubiA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11
Identity = 39/131 (29.77%), Postives = 52/131 (39.69%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            G  LL WP +W + +A P    P   +M              C VND  DR  D  V+RT  RP+ SG +T                      N  + +   ++L   + YP MKR+T  PQ  LG  F W
Sbjct:   24 GALLLLWPTLWALWVATPG--VPQLWIMAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGW 152          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_SHEFN (4-hydroxybenzoate octaprenyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=ubiA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11
Identity = 38/131 (29.01%), Postives = 54/131 (41.22%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHW 393
            GT LL WPC+  + +AA     PD K++              C +ND  DR +D  VERT +RP+ SG ++                      N          ++    YP MKR T  PQ +LG+ + W
Sbjct:   21 GTLLLLWPCLMALVLAAQG--LPDIKVLLIFIVGVVIMRANGCIINDFADRKLDAHVERTSMRPLVSGEVSVKEALTLFTLLGLAAFCLVLWLNPLVVQLSVVGIILTVMYPFMKRVTNMPQMFLGIVWSW 149          
BLAST of CK936592 vs. ExPASy Swiss-Prot
Match: UBIA_RALEH (4-hydroxybenzoate octaprenyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ubiA PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11
Identity = 40/132 (30.30%), Postives = 56/132 (42.42%), Query Frame = 1
Query:    1 GTWLLAWPCMWTITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRIPGASSLLXVFSYPLMKRFTFWPQAYLGLTFHWG 396
            GT LL WP +W + MAA  G  P + +               C +ND  DRD D  V+RTR RP+ +G +                       N  ++     + +   +YP  KRF   PQAYLG+ F +G
Sbjct:   19 GTLLLLWPTLWAMWMAA--GGPPAWGLFWIFVAGTFLMRSAGCAINDWADRDFDKHVKRTRERPLTAGKIAAWEALAVAAVLALVAFALVLPLNALTKWLAVVAAVVAGTYPFFKRFFAIPQAYLGIAFGFG 148          
The following BLAST results are available for this feature:
BLAST of CK936592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
UBIA_XANCB2.608e-1130.304-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_XANC82.608e-1130.304-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_RALEJ2.608e-1129.554-hydroxybenzoate octaprenyltransferase OS=Ralston... [more]
UBIA_POLNS2.608e-1129.554-hydroxybenzoate octaprenyltransferase OS=Polynuc... [more]
UBIA_NEIG12.608e-1129.554-hydroxybenzoate octaprenyltransferase OS=Neisser... [more]
UBIA_PSEFS3.406e-1128.034-hydroxybenzoate octaprenyltransferase OS=Pseudom... [more]
UBIA_AERS43.406e-1129.774-hydroxybenzoate octaprenyltransferase OS=Aeromon... [more]
UBIA_SHIFL4.448e-1129.774-hydroxybenzoate octaprenyltransferase OS=Shigell... [more]
UBIA_SHEFN4.448e-1129.014-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_RALEH4.448e-1130.304-hydroxybenzoate octaprenyltransferase OS=Ralston... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936592 ID=CK936592; Name=CK936592; organism=Citrus sinensis; type=EST; length=402bp
GGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGACAATTACAATGGCGGC
GCCACCTGGACACTTTCCGGATTTCAAAATGATGGCGCTCTTTGGCTGTG
GCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTTAATGACCTCCTTGAT
AGGGATATTGATAATATGGTGGAACGCACAAGGTTAAGGCCCATTGCGAG
TGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTCTTGGGTTTCAATTGC
TTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAATTTTAGCCGCATTCCG
GGGGCTTCATCTTTGCTGGNAGTCTTCTCCTACCCCCTCATGAAGAGGTT
TACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCTTTCACTGGGGAGCCT
TA
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