CK936584

Overview
NameCK936584
Unique NameCK936584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 1.582e-60
Identity = 118/174 (67.82%), Postives = 134/174 (77.01%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY------------KGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET KY+ TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD+   K+ ++RY EIVKE S+++KKVGYNP+ VPFVPISG+ GDNMIE +TN  WY            KG TLL+A+  I  P  P
Sbjct:   68 ERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDSV--KWDESRYQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGAVKGKTLLEAIDAIEPPVRP 239          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.067e-60
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLG +Q+I   NKMD T  K+S+ RY+EIVKEVS ++KK+G+NP+ VPFVPISG+ GDNM++ STN+ W+K            G TLL+A+  I  P  P
Sbjct:   68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGFRQLIVAINKMDTT--KWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLDESTNMPWFKGWNKETKAGSKTGKTLLEAIDAIEPPVRP 239          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.067e-60
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLG +Q+I   NKMD T  K+S+ RY+EIVKEVS ++KK+G+NP+ VPFVPISG+ GDNM++ STN+ W+K            G TLL+A+  I  P  P
Sbjct:   68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGFRQLIVAINKMDTT--KWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLDESTNMPWFKGWNKETKAGSKTGKTLLEAIDAIEPPVRP 239          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.067e-60
Identity = 114/162 (70.37%), Postives = 130/162 (80.25%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET   + T+IDAPGHRDFIKNMITGTSQAD A+LII S TG FEAGISK+GQTREHALLA+T+GVKQM+   NKMD+T P YS+ RY+EI KEVS++L KVGY P K+ FVPISGF+GDN+ E STN+ WYKG TL  AL     P  P
Sbjct:   68 ERGITIDIALWKFETENRHYTIIDAPGHRDFIKNMITGTSQADAAILIIASGTGEFEAGISKEGQTREHALLAYTMGVKQMVVAMNKMDSTEPPYSEDRYEEIKKEVSTFLAKVGYKPAKMNFVPISGFQGDNIQENSTNMPWYKGPTLCAALDSFKIPKRP 229          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_APIME (Elongation factor 1-alpha OS=Apis mellifera PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 2.699e-60
Identity = 118/174 (67.82%), Postives = 132/174 (75.86%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD T P YS+AR++EI KEVSSY+KK+GYN   V FVPISG+ GDNM+E S    WYK            G TL++AL  I  P  P
Sbjct:   68 ERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRP 241          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 3.525e-60
Identity = 119/174 (68.39%), Postives = 136/174 (78.16%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY------------KGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T  K+S+ R+ EIVKE S+++KKVGYNP+ + FVPISG+ GDNM+E STN+ W+            KG TLLDA+  I  P  P
Sbjct:   68 ERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDTT--KWSEQRF-EIVKETSNFVKKVGYNPKSIAFVPISGWHGDNMLEESTNMGWFKGWTKETKAGVSKGKTLLDAIDAIEPPSRP 238          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 4.604e-60
Identity = 117/174 (67.24%), Postives = 134/174 (77.01%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY------------KGSTLLDAL*HINEPXXP 491
            ERGITIDIALWKFET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD+   K+ ++R+ EIVKE S+++KKVGYNP+ VPFVPISG+ GDNMIE +TN  WY            KG TLL+A+  I +P  P
Sbjct:   68 ERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAIDAIEQPSRP 239          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 6.013e-60
Identity = 113/164 (68.90%), Postives = 132/164 (80.49%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYN--PEKVPFVPISGFEGDNMIERSTNLDWYKGSTLLDAL*HINEPXXP 491
            ERGITIDI+LWKFET K + T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAG SK+GQTREHALLA TLGVKQMI CCNKMD  +  YS+ARY EI  E++S+L KVGY    E++PF+PISGF GDNMIE S N+ WYKG TLL+AL +++ P  P
Sbjct:   68 ERGITIDISLWKFETRKDFFTIIDAPGHRDFIKNMITGTSQADVAILVIASGAGEFEAGYSKNGQTREHALLANTLGVKQMIVCCNKMDDKSVNYSEARYKEIKNEMTSFLTKVGYAKVEERIPFIPISGFNGDNMIEHSANMPWYKGPTLLEALDNVHPPKRP 231          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 6.013e-60
Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK------------GSTLLDAL*HINEPXXP 491
            ER ITIDIALWKFET KYY TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD+    +S+ RY+EIVKE S+++KKVG+NP+ VPFVPISG+ GDNMIE +TN  WYK            G TLL+A+  ++ P  P
Sbjct:   68 ERVITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAINKMDSV--NWSEDRYNEIVKETSNFIKKVGFNPKAVPFVPISGWNGDNMIEATTNASWYKGWHKETKEGKATGKTLLEAIDAVDPPTRP 239          
BLAST of CK936584 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.750e-59
Identity = 118/176 (67.05%), Postives = 134/176 (76.14%), Query Frame = 3
Query:    6 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYK--------------GSTLLDAL*HINEPXXP 491
            ERGITIDIALWK ET KY  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T   +S+AR++EIVKE S+++KKVGYNP+ V FVPISG+ GDNM+E STN+ WYK              G TL+DA+  I  P  P
Sbjct:   68 ERGITIDIALWKSETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTT--NWSEARFNEIVKETSNFIKKVGYNPKTVAFVPISGWHGDNMLEPSTNMPWYKGWSKEVKGSSSPATGKTLVDAIDAIEPPVRP 241          
The following BLAST results are available for this feature:
BLAST of CK936584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_ASHGO1.582e-6067.82Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]
EF1A2_RHIRA2.067e-6067.24Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A1_RHIRA2.067e-6067.24Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A1_EUPCR2.067e-6070.37Elongation factor 1-alpha 1 OS=Euplotes crassus GN... [more]
EF1A_APIME2.699e-6067.82Elongation factor 1-alpha OS=Apis mellifera PE=3 S... [more]
EF1A_PUCGR3.525e-6068.39Elongation factor 1-alpha OS=Puccinia graminis GN=... [more]
EF1A_YEAST4.604e-6067.24Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A_BLAHO6.013e-6068.90Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A_ARXAD6.013e-6067.24Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]
EF1A_PIRIN1.750e-5967.05Elongation factor 1-alpha OS=Piriformospora indica... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_F12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936584 ID=CK936584; Name=CK936584; organism=Citrus sinensis; type=EST; length=492bp
AGTGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGACC
ACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGTGACTTTAT
CAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGTCCTTATCA
TTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAG
ACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGAT
TTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTACTCAAAGGCTA
GGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGA
TACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGTGA
CAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGGGGTCCACCC
TGCTGGACGCTCTTTGACATATCAATGAGCCAAANGNGCCCT
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