CK936566

Overview
NameCK936566
Unique NameCK936566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 5.182e-96
Identity = 176/210 (83.81%), Postives = 188/210 (89.52%), Query Frame = 3
Query:   90 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAP FEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGI+GIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHV
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 5.182e-96
Identity = 176/210 (83.81%), Postives = 188/210 (89.52%), Query Frame = 3
Query:   90 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAP FEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGI+GIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHV
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.767e-96
Identity = 175/210 (83.33%), Postives = 189/210 (90.00%), Query Frame = 3
Query:   90 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAPLFEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGI+GIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA++Y+VMQCLGAICGAGVVKGF    QY  L GGAN +AHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHV
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 6.334e-94
Identity = 172/210 (81.90%), Postives = 185/210 (88.10%), Query Frame = 3
Query:   90 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            MEGKEEDVRLGAN++ ERQPIGTAAQ  + KDY EPP AP+FE  EL SWSFYRAGIAEF+ATFLFLYIS+LTVMGV KS +KC+TVGI+GIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYM MQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKR+ARDSHV
Sbjct:    1 MEGKEEDVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQ-RGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHV 209          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.407e-93
Identity = 172/210 (81.90%), Postives = 184/210 (87.62%), Query Frame = 3
Query:   90 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            MEGKEEDVRLGANKF+ER  IGTAAQ  D KDY EPPPAPLFEPGELKSWSFYR GIAEF+ATFLFLYIS+LTVMGV KS +KC+TVGI+GIAW+FGGMI  LVYCTAGIS GHINPAVT GLFLARKLSLTRA+FY++MQCLGAICG GVVKGF   G Y    G  NVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR ARDSHV
Sbjct:    1 MEGKEEDVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQ-QGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHV 208          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.135e-89
Identity = 161/214 (75.23%), Postives = 182/214 (85.05%), Query Frame = 3
Query:   78 GLAEMEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            G  +   +EEDVR+G ++F ERQPIGTAA    G+DY EPP APLFE  EL SWSFYRAGIAEF+ATFLFLY++VLTVMGV KS +KC TVGI+GIAWAFGGMIF LVYCTAG+SGGHINPAVT GL LARKLSLTRA++Y+VMQCLGA+CGAGVVK F G+  Y    GGAN V+ GYTKGDGLGAE++GTFVLVYTVFSATDAKR+ARDSHV
Sbjct:    4 GTLQDRSEEEDVRVGVDRFPERQPIGTAADDL-GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF-GSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHV 215          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 4.268e-74
Identity = 139/190 (73.16%), Postives = 151/190 (79.47%), Query Frame = 3
Query:  150 IGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            +    +T  GKDYV+PPPAPL + GELKSWSFYRA IAEFIAT LFLY++V TV+G  K    C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YM+ QCLGAICG G VK FM    Y  L GGAN VA GY+KG  LGAEIIGTFVLVYTVFSATD KRSARDSH+
Sbjct:    5 VSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKT-PYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHI 193          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.719e-73
Identity = 135/183 (73.77%), Postives = 149/183 (81.42%), Query Frame = 3
Query:  171 QDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            Q GKDYV+PPPAP F+ GELK WSF+RA IAEFIAT LFLYI+V TV+G  K    C++VG+ GIAW+FGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YM+ QC GAICG G+VK FM  G Y +  GGAN VA GY KG   GAE+IGTFVLVYTVFSATD KRSARDSHV
Sbjct:   14 QHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFM-KGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHV 195          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.382e-71
Identity = 136/181 (75.14%), Postives = 146/181 (80.66%), Query Frame = 3
Query:  177 GKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            GKDYV+PPPAPL +  ELK WSFYRA IAEFIAT LFLY++V TV+G       C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G+VK FM    Y RL GGAN VA GY+ G  LGAEIIGTFVLVYTVFSATD KRSARDSHV
Sbjct:   12 GKDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFM-MTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHV 191          
BLAST of CK936566 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69
Identity = 131/187 (70.05%), Postives = 144/187 (77.01%), Query Frame = 3
Query:  180 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-------VKSNTKCSTVGIRGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 719
            KDY +PPPAPL +P EL  WS YRA IAEFIAT LFLYI+VLT++G        +  NT+C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFL RK+SL RAL YM+ QC GAICGAG+ KGF     Y R  GG N V+ GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHV
Sbjct:   17 KDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQ-KSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHV 202          
The following BLAST results are available for this feature:
BLAST of CK936566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
PIP11_VICFA5.182e-9683.81Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH5.182e-9683.81Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ARATH6.767e-9683.33Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP13_ORYSJ6.334e-9481.90Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE2.407e-9381.90Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE6.135e-8975.23Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP27_ARATH4.268e-7473.16Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP1_ATRCA4.719e-7373.77Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP28_ARATH3.382e-7175.14Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_MAIZE1.088e-6970.05Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004520_H12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IIIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936566 ID=CK936566; Name=CK936566; organism=Citrus sinensis; type=EST; length=721bp
GGGGATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAAGTGCT
TCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAA
AGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGA
TTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCA
CCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAG
GGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCG
TACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTC
GGCATTCGAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGT
TTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACAC
TCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTAC
ATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGG
TTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCG
TAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGT
ACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCAAAACGGAG
CGCCAGGGACTCTCATGTTCC
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