CK936534

Overview
NameCK936534
Unique NameCK936534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_AETCO (Apocytochrome f OS=Aethionema cordifolium GN=petA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.571e-14
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLRVQGLLFFL SVVLAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  281 VLQDPLRVQGLLFFLGSVVLAQIFLVLKKKQFEKVQLSEMNF 322
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_VITVI (Apocytochrome f OS=Vitis vinifera GN=petA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 39/42 (92.86%), Postives = 42/42 (100.00%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLR+QGLLFFL+SV+LAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPLRIQGLLFFLSSVILAQIFLVLKKKQFEKVQLSEMNF 320
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_NYMAL (Apocytochrome f OS=Nymphaea alba GN=petA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 39/42 (92.86%), Postives = 42/42 (100.00%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLR+QGLLFFLASV+LAQIFLVLKKKQFEKVQL+EMNF
Sbjct:  281 VLQDPLRIQGLLFFLASVILAQIFLVLKKKQFEKVQLAEMNF 322
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_EUCGG (Apocytochrome f OS=Eucalyptus globulus subsp. globulus GN=petA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDP RVQGLLFFLASV+LAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPFRVQGLLFFLASVILAQIFLVLKKKQFEKVQLSEMNF 320
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_CUCSA (Apocytochrome f OS=Cucumis sativus GN=petA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLRVQGLLFF ASV+LAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPLRVQGLLFFFASVILAQIFLVLKKKQFEKVQLSEMNF 320
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_CERDE (Apocytochrome f OS=Ceratophyllum demersum GN=petA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLRVQGLLFF ASV+LAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPLRVQGLLFFFASVILAQIFLVLKKKQFEKVQLSEMNF 320
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_BUXMI (Apocytochrome f OS=Buxus microphylla GN=petA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.052e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLRVQGLLFF ASV+LAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPLRVQGLLFFFASVILAQIFLVLKKKQFEKVQLSEMNF 320
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_SPIOL (Apocytochrome f OS=Spinacia oleracea GN=petA PE=3 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.680e-14
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLR+QGLLFF ASV+LAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPLRIQGLLFFFASVILAQIFLVLKKKQFEKVQLSEMNF 320
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_SOYBN (Apocytochrome f OS=Glycine max GN=petA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.680e-14
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLRVQGLLFF AS++LAQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPLRVQGLLFFFASIILAQIFLVLKKKQFEKVQLSEMNF 320
[Close]
BLAST of CK936534 vs. ExPASy Swiss-Prot
Match: CYF_LOTJA (Apocytochrome f OS=Lotus japonicus GN=petA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.680e-14
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 3 
Query:    3 VLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 128
            VLQDPLRVQGLLFFLAS++ AQIFLVLKKKQFEKVQLSEMNF
Sbjct:  279 VLQDPLRVQGLLFFLASIIFAQIFLVLKKKQFEKVQLSEMNF 320
The following BLAST results are available for this feature:
BLAST of CK936534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CYF_AETCO1.571e-1497.62Apocytochrome f OS=Aethionema cordifolium GN=petA ... [more]
CYF_VITVI2.052e-1492.86Apocytochrome f OS=Vitis vinifera GN=petA PE=3 SV=... [more]
CYF_NYMAL2.052e-1492.86Apocytochrome f OS=Nymphaea alba GN=petA PE=3 SV=1[more]
CYF_EUCGG2.052e-1495.24Apocytochrome f OS=Eucalyptus globulus subsp. glob... [more]
CYF_CUCSA2.052e-1495.24Apocytochrome f OS=Cucumis sativus GN=petA PE=3 SV... [more]
CYF_CERDE2.052e-1495.24Apocytochrome f OS=Ceratophyllum demersum GN=petA ... [more]
CYF_BUXMI2.052e-1495.24Apocytochrome f OS=Buxus microphylla GN=petA PE=3 ... [more]
CYF_SPIOL2.680e-1492.86Apocytochrome f OS=Spinacia oleracea GN=petA PE=3 ... [more]
CYF_SOYBN2.680e-1492.86Apocytochrome f OS=Glycine max GN=petA PE=3 SV=1[more]
CYF_LOTJA2.680e-1492.86Apocytochrome f OS=Lotus japonicus GN=petA PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_B12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936534 ID=CK936534; Name=CK936534; organism=Citrus sinensis; type=EST; length=801bp
GGGTACTTCAAGATCCATTACGTGTCCAAGGCCTTTTGTTCTTTTTGGCA
TCTGTTGTTTTGGCACAAATATTTTTGGTTCTTAAAAAGAAACAGTTTGA
GAAGGTTCAATTGTCCGAAATGAATTTCTAGATCCGCGGATTTATCAACA
TCAAGTTTGTAAAAAGAATCAAATTTTTCTTGGCAATTCTAATTATATTA
TGTAGGAGCACAAAACTTACGAAAAGCCTTTTGCTTATTTCGATTCTGTT
TCTACCGGATGTCGGGAATTTCTTGTACTGCATTCCTAAAGCACAGTATA
TATATTGTGAAGAAGACTATTGAACTTTCCCCCTTCTTTGTTTTTTCAAT
ACAAACTGGAGAATGTCACTATTACCATATTTAAATATCATAGAATGTGT
CAATAGTTTTCGATTCTATTAGACTAGAATCAAATTCGACTAGACCTAGA
TGCTAAACATAAGATAAGGAAGCGGAGAATATAGAATATAAAGAAAAAAA
AGGAAGGATAAATGAAGGGGAACAGGGGATTCTAAAGGGGATTATTCGTC
GTACTCGTCTTCGGCACCCGAAAGGGAATTTCCCACATCCCTTTCGGGTG
CCGAAATAATAAGGGTTCTTACTTCCATTCATCAAAGATTCCTATTCGTA
GTTTCGAATTTTTCCAGGTTTATCAGAACTCTTTTTGGATTTTTATTTTG
GATTTCTATTAAGTATTGGTAAAACAAAAAAAGAAATAGAAGTCATTGAA
CAAATGGCACTTCTTCCATGAACTTAGAAAACAATTTGAATTGATGAGAC
A
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