CX675148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BURXL (Nod factor export ATP-binding protein I OS=Burkholderia xenovorans (strain LB400) GN=nodI PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.285e-15 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 115 LSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 LSGG KR+L++A A++ DP ++I+DEP+TG+DP A+ +WE + L R GKT ++LTTH M EA+ LC R+ ++ G+ G+P L Sbjct: 137 LSGGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLRSLLAR-GKT-ILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPSAL 223
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_RHISN (Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain NGR234) GN=nodI PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.072e-14 Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381 L ++ R G+ +++ + L L A P LSGG +R+L++A A+I DP ++ILDEP+TG+DP A+ +WE + L GKT ++LTTH M EA LC R+ ++ G+ G P L Sbjct: 138 LLVFGRYFGLHTRELEEAIPPLLDFARLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSL-LALGKT-ILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHAL 262
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NODI_BRASS (Nod factor export ATP-binding protein I OS=Bradyrhizobium sp. (strain SNU001) GN=nodI PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.074e-14 Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGN-KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQ 471 L ++ R G++ R + V+ L+EF L+ +L GG KR+L++A A+I DP ++++DEP+TG+DP A+ +WE + L R GKT ++LTTH M EA+ LC + ++ G G P L + E+ DL+ L ++I+ Sbjct: 100 LLVFGRYFGMSA-RTIEAVVPSLLEFARLESKADVRVSLLGGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLAR-GKT-ILLTTHFMEEAERLCDPLCVLESGCKIAEGEPDALIDE-----HIGCNVIEIYGGDLDQLRELIR 249
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: NOSF_PSEST (Copper transport ATP-binding protein nosF OS=Pseudomonas stutzeri GN=nosF PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.185e-13 Identity = 48/148 (32.43%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVD 444 L +AR+KG A ++D++ L + L A + T S G +++L +A A++G+P +++LDEP+ G+DPIA + ++ +I RL RQ T++IL +H + +A R I+ G L+ +GS L+ G L + ++ + +S D Sbjct: 95 LRHFARLKGAALTQVDEL----LEQVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPIATQDLYLLIDRL--RQRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQLRAEAG--LPVRIRASGISERD 234
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: CBIO2_STAS1 (Cobalt import ATP-binding protein cbiO 2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=cbiO2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.022e-13 Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 67 LVEFDLLKHAKKPS-FTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL--KTRFGNFLELEVKPTEVSSVDLEDLCQ 462 L++F + + S F +SGG RK+++ + DP IVILDEP+ G+DP ++ + ++I +L Q KT +IL TH MN+ I IM GQL SP+ L T + N L L+V D+ED Q Sbjct: 129 LIDFGFSRDILQQSPFQMSGGQMRKIAITSILAMDPDIVILDEPTAGLDPKSRDQIMKMIKKLQVEQNKT-IILVTHEMNDVAKYVDEIKIMKQGQLVEECSPRKLFSDTNYVNQLHLDVPDVVKLQRDIEDKYQ 262
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: YFIL_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiL OS=Bacillus subtilis GN=yfiL PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.641e-13 Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 4 ELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 396 ++Y G A+ R +V L L + AK T SGG KR++++ A++ P ++I+DEP+ G+DP ++ + E + +L+ G T VI T+H M E + LC RIGI+ G++ IG+ L +R G Sbjct: 100 KMYGLTHGEAKKRAAEV----LEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLN-ETGMT-VIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLG 224
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: YADG_ECOLI (Uncharacterized ABC transporter ATP-binding protein yadG OS=Escherichia coli (strain K12) GN=yadG PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12 Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 67 LVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 354 L + DL + + LSGG KR+L +A A++ +P ++ILDEP+ G+D +R MW + L+ + T +ILTTH + EA+ LC IGI+ G+L Sbjct: 121 LKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDK--GTTIILTTHYLEEAEMLCRNIGIIQHGEL 214
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: Y1589_THETN (Putative ABC transporter ATP-binding protein TTE1589 OS=Thermoanaerobacter tengcongensis GN=TTE1589 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.813e-12 Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 16 RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSV 441 R++G E + + V E L D+ K+ F LS G +++++VA + P ++ILDEP+TG+D ++ M E++ RL+ G T +I+ TH+M ++ +M G++ G + + LEL +KP + S+ Sbjct: 410 RMRGCTEEEVKERVAEALKAVDMEGFEKEDPFALSKGERQRIAVASILAARPKVIILDEPTTGLDYKEQKRMMELVKRLN-ESGHT-IIMITHTMWIVAEYAHKVAVMRDGKIEMYGKVRDVFKEEERLLELSLKPPSIVSL 549
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: DRRA_STRPE (Daunorubicin resistance ATP-binding protein drrA OS=Streptomyces peucetius GN=drrA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12 Identity = 56/206 (27.18%), Postives = 99/206 (48.06%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG-NFLELEVKPTEVSSVDLEDLCQ----IIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLSQEML 603 L + R++G + R + E + F L + T SGG +R+L +A +++ P ++ LDEP+TG+DP ++ +W+++ L T V+LTT ++EA L RI ++ G++ G+ LK+ G N L L + + S + E L + R D P+ + +DD + + +S + SL Q L Sbjct: 102 LVMMGRLQGYSWARARERAAELIDGFGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALV--DAGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELKSSLGSNVLRLRLHDAQ-SRAEAERLLSAELGVTIHRDSD-PTALSARIDDPRQGMRALAELSRTHLEVRSFSLGQSSL 303
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: YBHF_SHIFL (Uncharacterized ABC transporter ATP-binding protein ybhF OS=Shigella flexneri GN=ybhF PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11 Identity = 42/133 (31.58%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 399 L ++ + G+ ++ + F L A + L G K++L++A +++ +P I+ LDEP++G+DP+ +R W I+ + +G T V++TTH M+EA+ C RIG++ G+L G+P LK + N Sbjct: 423 LRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSM-VEKGVT-VMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSAN 552 HSP 2 Score: 67.3958 bits (163), Expect = 9.392e-11 Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 1 LELYARIKGVA-EYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTE 429 L LYA ++ V E R +L+EF L + + LSGG K+KL +A ++G+P +++LDEP G+DPI++R +W+++ L+ G+ +IL + S + C + +M G+L G P+ L L P E Sbjct: 101 LNLYADLRSVTGEARKQ--TFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA---GEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHE 240 The following BLAST results are available for this feature:
BLAST of CX675148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675148 ID=CX675148; Name=CX675148; organism=Citrus sinensis; type=EST; length=746bpback to top |