CX675148

Overview
NameCX675148
Unique NameCX675148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: YBHF_ECOLI (Uncharacterized ABC transporter ATP-binding protein ybhF OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11
Identity = 42/133 (31.58%), Postives = 76/133 (57.14%), Query Frame = 1
Query:    1 LELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 399
            L  ++ + G+     ++ +      F L   A   +  L  G K++L++A +++ +P I+ LDEP++G+DP+ +R  W  I+ +   +G T V++TTH M+EA+  C RIG++  G+L   G+P  LK +  N
Sbjct:  423 LRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSM-VEKGVT-VMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSAN 552          

HSP 2 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 1
Query:    1 LELYARIKGVA-EYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTE 429
            L LYA ++ V  E R       +L+EF  L     + +  LSGG K+KL +A  ++G+P +++LDEP  G+DPI++R +W+++  L+   G+  +IL + S  +    C  + +M  G+L   G P+ L         L   P E
Sbjct:  101 LNLYADLRSVTGEARKQ--TFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA---GEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHE 240          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: YHCH_BACSU (Uncharacterized ABC transporter ATP-binding protein yhcH OS=Bacillus subtilis GN=yhcH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11
Identity = 48/150 (32.00%), Postives = 93/150 (62.00%), Query Frame = 1
Query:    1 LELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS--PQHLKTRFGNFLELEVKPTEVSSV 441
            L+ +AR +KGV + ++D+VV  +LV      H K  +++L  G +++L +A  ++ DP ++ILDEP+ G+DP   R + + + +L TR+   AVI+++H ++E + +C RI I+  G+L  I +   +++      F ++E +P+E ++V
Sbjct:   98 LQQFARMVKGVTKEKIDEVV--ELVGLTDRIHDKVKTYSL--GMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKL-TRERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKDENIDENDTYFFQVE-QPSEAATV 241          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: PHNC2_SILST (Phosphonates import ATP-binding protein phnC 2 OS=Silicibacter sp. (strain TM1040) GN=phnC2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 38/119 (31.93%), Postives = 68/119 (57.14%), Query Frame = 1
Query:   37 YRMDDV--VMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 387
            Y M D+   +E L    + +HA K +  LSGG ++++++A A++ DP I++ DEP   +DP+  + + E + R+    G+T VI   H+++ A+  C R+  M  G++   G P+ L T
Sbjct:  117 YPMADIHKAIEILDRLGIAEHAPKRAEALSGGQQQRVAIARALMQDPKIILADEPIASLDPMNAQTVMEALRRIHEEDGRT-VIANLHTLDTARRYCDRVVGMRDGRIVFDGLPEQLTT 234          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: CBIO1_LISMO (Cobalt import ATP-binding protein cbiO 1 OS=Listeria monocytogenes GN=cbiO1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 47/163 (28.83%), Postives = 82/163 (50.31%), Query Frame = 1
Query:   31 AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDD 519
            A+ R   V+ E  +  ++L  +    F LSGG  R++++A  +  DP +++LDEP+ G+DP  +  + E+   L   +G T V L THSM +A     +I +M  G +  IG+P+ +  +    ++L +   +V         Q + ER FD+   +  L  D
Sbjct:  121 AKLRAKKVIYEVGLTEEILSRSP---FELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTV-LVTHSMEDAARYAEKIVLMKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRF------QGLFERKFDVKLTKTCLTID 273          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: Y804_OCEIH (Putative ABC transporter ATP-binding protein OB0804 OS=Oceanobacillus iheyensis GN=OB0804 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 1
Query:   67 LVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 381
            L  F LL H  K  FTLSGG KR+LSVA  +   P +++ DEP+ G D    + +  +I  L   QG TA+I  TH M+     C R  ++  G +R  G+PQ L
Sbjct:  395 LQAFRLLDHQWKNPFTLSGGQKRRLSVATMLDETPDLLLFDEPTFGQDAHTTKELMNMILELQA-QG-TAIIFVTHDMDLVDTYCERALVIDKGSVRFDGNPQSL 497          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: TAUB_RALEJ (Taurine import ATP-binding protein tauB OS=Ralstonia eutropha (strain JMP134) GN=tauB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 1
Query:   16 RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 339
            R++GV       +  EKL +  L K A KP + LSGG ++++ +A A+  DP ++++DEP   +D + +  +  +I RL  R+ K  V   THS+ EA  L TR+ +M
Sbjct:  103 RLRGVNRAERLRIAHEKLAQVGLEKVASKPVYQLSGGMQQRVGIARALANDPEVMLMDEPLGALDALTRESIQALILRLWAREQK-IVFFITHSVEEALFLATRLIVM 209          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: CBIO1_LISMF (Cobalt import ATP-binding protein cbiO 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=cbiO1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 47/163 (28.83%), Postives = 82/163 (50.31%), Query Frame = 1
Query:   31 AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDD 519
            A+ R   V+ E  +  ++L  +    F LSGG  R++++A  +  DP +++LDEP+ G+DP  +  + E+   L   +G T V L THSM +A     +I +M  G +  IG+P+ +  +    ++L +   +V         Q + ER FD+   +  L  D
Sbjct:  121 AKLRAKKVIYEVGLTEEILSRSP---FELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTV-LVTHSMEDAARYAEKIVLMKAGTVLQIGTPREVFAKPDELVDLGLSVPDVVRF------QGLFERKFDVKLTKTCLTID 273          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: CBIO1_LISIN (Cobalt import ATP-binding protein cbiO 1 OS=Listeria innocua GN=cbiO1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 1
Query:   31 AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEV 432
            A+ R   V+ E  +  ++L  +    F LSGG  R++++A  +  DP +++LDEP+ G+DP  +  + E+   L   +G T V L THSM +A     +I +M  G +  IGSP+ +  +    ++L +   +V
Sbjct:  121 AKLRAKKVIYEVGLTEEILSRSP---FELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTV-LVTHSMEDAARYAEKIVLMKAGTVLKIGSPREIFAKPDELVDLGLSVPDV 250          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: Y246_THETN (Putative ABC transporter ATP-binding protein TTE0246 OS=Thermoanaerobacter tengcongensis GN=TTE0246 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 39/120 (32.50%), Postives = 73/120 (60.83%), Query Frame = 1
Query:   25 GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM-VGGQLRCIGSPQHL 381
            GV +  ++ +V E L+ F + K   +P   LSGG K+K+++A  ++ +P +++LDEP+ G+DP +K+++   +  L+ ++G T VI  TH +  A+    RI I+    ++  IGSP+ +
Sbjct:  112 GVKKEEVEKLVNEILISFGIEKLKDRPPHRLSGGEKKKVALASIIVINPDVLLLDEPTNGLDPRSKKWLLSKLEELN-QKGATLVI-ATHDLEMAKKFSDRIIILNEEHKIETIGSPEEI 229          
BLAST of CX675148 vs. ExPASy Swiss-Prot
Match: CBIO1_LISW6 (Cobalt import ATP-binding protein cbiO 1 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=cbiO1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 1
Query:   31 AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEV 432
            A+ R   V+ E  +  ++L  +    F LSGG  R++++A  +  DP +++LDEP+ G+DP  +  + E+   L   +G T V L THSM +A     +I +M  G +  IGSP+ +  +    ++L +   +V
Sbjct:  121 AKLRAKKVIYEVGLTEEILSRSP---FELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTV-LVTHSMEDAARYAEKIVLMKAGTVLQIGSPREIFAKPDALVDLGLSVPDV 250          
The following BLAST results are available for this feature:
BLAST of CX675148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
YBHF_ECOLI1.109e-1131.58Uncharacterized ABC transporter ATP-binding protei... [more]
YHCH_BACSU1.892e-1132.00Uncharacterized ABC transporter ATP-binding protei... [more]
PHNC2_SILST2.472e-1131.93Phosphonates import ATP-binding protein phnC 2 OS=... [more]
CBIO1_LISMO2.472e-1128.83Cobalt import ATP-binding protein cbiO 1 OS=Lister... [more]
Y804_OCEIH3.228e-1140.00Putative ABC transporter ATP-binding protein OB080... [more]
TAUB_RALEJ3.228e-1135.19Taurine import ATP-binding protein tauB OS=Ralston... [more]
CBIO1_LISMF3.228e-1128.83Cobalt import ATP-binding protein cbiO 1 OS=Lister... [more]
CBIO1_LISIN3.228e-1130.60Cobalt import ATP-binding protein cbiO 1 OS=Lister... [more]
Y246_THETN4.216e-1132.50Putative ABC transporter ATP-binding protein TTE02... [more]
CBIO1_LISW65.506e-1130.60Cobalt import ATP-binding protein cbiO 1 OS=Lister... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60B07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60B07-C14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675148 ID=CX675148; Name=CX675148; organism=Citrus sinensis; type=EST; length=746bp
CTTGAGCTTTATGCTAGGATAAAAGGAGTCGCAGAATACAGGATGGATGA
TGTTGTTATGGAAAAGTTAGTTGAGTTTGACTTGTTGAAGCATGCCAAAA
AACCATCATTTACCCTGAGCGGGGGTAACAAGCGTAAATTATCGGTTGCA
ATTGCAATGATTGGAGATCCTCCAATTGTTATTCTTGATGAGCCATCCAC
AGGCATGGATCCAATTGCTAAACGATTCATGTGGGAAGTGATATCTCGTT
TATCAACTAGACAAGGGAAGACAGCAGTTATCCTTACAACCCACAGCATG
AATGAAGCTCAAGCATTATGCACCAGAATTGGAATAATGGTTGGCGGCCA
GCTTAGATGTATTGGAAGTCCCCAGCATTTAAAAACACGGTTTGGGAATT
TTCTTGAGCTAGAGGTTAAACCTACTGAGGTTAGCTCGGTAGATTTGGAA
GACCTTTGCCAGATTATTCAAGAAAGAGTATTTGACATTCCTTCTCAGCG
AAGGAGCTTGTTAGATGACCTTGAAGTTTGCATTGGTGGTATTGACTCCA
TTTCATCAGAAAATGCAACGGCGGCAGAAATTAGCTTGTCACAGGAAATG
TTACTTATAGTTGGGTGCTGGCTTGGCAATGAAGAAAGAATAAAAACACT
TATAAGTTCCTCCTCTTCTCCTGATAGAATATTTGGGGAACAATTGTCTG
AGCAGTTGGTTCGAGATGGAGGTATACAATTGCCGATATTCTCCGA
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