CK936495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACT1_ONCVO (Actin-1 OS=Onchocerca volvulus GN=act-1a PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.835e-105 Identity = 183/191 (95.81%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 23 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213 HSP 2 Score: 27.335 bits (59), Expect = 3.835e-105 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 E++ LV DNG+GM KAG Sbjct: 4 EEVAALVVDNGSGMCKAG 21
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_XENTR (Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_XENLA (Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_TRIVU (Actin, cytoplasmic 1 OS=Trichosurus vulpecula GN=ACTB PE=1 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_SPECI (Actin, cytoplasmic 1 OS=Spermophilus citellus GN=ACTB PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_SIGHI (Actin, cytoplasmic 1 OS=Sigmodon hispidus GN=ACTB PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_SHEEP (Actin, cytoplasmic 1 OS=Ovis aries GN=ACTB PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_RAT (Actin, cytoplasmic 1 OS=Rattus norvegicus GN=Actb PE=1 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_PONAB (Actin, cytoplasmic 1 OS=Pongo abelii GN=ACTB PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20
BLAST of CK936495 vs. ExPASy Swiss-Prot
Match: ACTB_PIG (Actin, cytoplasmic 1 OS=Sus scrofa GN=ACTB PE=2 SV=2) HSP 1 Score: 373.629 bits (958), Expect = 3.835e-105 Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 1 Query: 181 AGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLFLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDM 753 AGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVL LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+ Sbjct: 22 AGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212 HSP 2 Score: 28.1054 bits (61), Expect = 3.835e-105 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 125 EDIQPLVCDNGTGMVKAG 178 +DI LV DNG+GM KAG Sbjct: 3 DDIAALVVDNGSGMCKAG 20 The following BLAST results are available for this feature:
BLAST of CK936495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 458
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936495 ID=CK936495; Name=CK936495; organism=Citrus sinensis; type=EST; length=754bpback to top |