CK936491

Overview
NameCK936491
Unique NameCK936491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15
Identity = 39/64 (60.94%), Postives = 42/64 (65.62%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKC 731
            YRGVRRRPWGK+AAEIRDP + G RVWLGT+              FQLRGSKA LNFP   G C
Sbjct:   92 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSC 155          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAG-----------KCDSNAAVARECDSSAEAGACETKRK 803
            HYRGVR+RPWGK+AAEIRDP + G RVWLGT+              F++RG+KA+LNFP   G           K   + + +    S++E+G+ + +RK
Sbjct:  106 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVTVKRRLSESASSSVSSASESGSPKRRRK 205          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15
Identity = 42/96 (43.75%), Postives = 55/96 (57.29%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAG-------KCDSNAAVARECDSSAEAGACETKRK 803
            HYRGVRRRPWGK+AAEIRDP + G RVWLGT+              +++RGSKA LNFP   G       +  +    + E  SS+E  + + +RK
Sbjct:  104 HYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASSSENSSPKRRRK 199          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAG 725
            HYRGVR+RPWGK+AAEIRDP + G RVWLGT+              +++RGSKA+LNFP   G
Sbjct:   98 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIG 160          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAG 725
            HYRGVR+RPWGK+AAEIRDP + G RVWLGT+              +++RGSKA+LNFP   G
Sbjct:  102 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIG 164          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14
Identity = 37/60 (61.67%), Postives = 41/60 (68.33%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            YRGVRRRPWGKYAAEIRD  R G RVWLGTF              F++RG+KA+LNFP E
Sbjct:   59 YRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSE 118          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14
Identity = 37/60 (61.67%), Postives = 40/60 (66.67%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            YRGVRRRPWGK+AAEIRD TR G+RVWLGTF              F +RGS AILNF  E
Sbjct:   82 YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 141          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            YRGVR+RPWGK+AAEIRD TR+G+RVWLGTF              F L+GS A+LNFP +
Sbjct:   82 YRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPAD 141          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 42/89 (47.19%), Postives = 50/89 (56.18%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDS-NAAVARECDSSAEAGACETKRK 803
            YRGVRRRPWGKYAAEIRD  + G RVWLGTF              + +RG  AILNFP E       +++ A    SSA A A  + R+
Sbjct:   15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHEYNMGSGVSSSTAMAGSSSASASASSSSRQ 103          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13
Identity = 38/79 (48.10%), Postives = 46/79 (58.23%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAE 776
            YRGVRRRPWGKYAAEIRD  + G RVWLGTF              + +RG  AILNFP E      +++ A    SS++
Sbjct:   20 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSSSSSQ 98          
The following BLAST results are available for this feature:
BLAST of CK936491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ERF99_ARATH3.292e-1560.94Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF1_SOLLC4.299e-1541.00Ethylene-responsive transcription factor 1 OS=Sola... [more]
ERF1_TOBAC9.578e-1543.75Ethylene-responsive transcription factor 1 OS=Nico... [more]
ERF2_TOBAC1.251e-1455.56Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY1.251e-1455.56Ethylene-responsive transcription factor 2 OS=Nico... [more]
PTI5_SOLLC1.634e-1461.67Pathogenesis-related genes transcriptional activat... [more]
ERF92_ARATH4.753e-1461.67Ethylene-responsive transcription factor 1B OS=Ara... [more]
ERF94_ARATH6.208e-1458.33Ethylene-responsive transcription factor ERF094 OS... [more]
ERF96_ARATH8.108e-1447.19Ethylene-responsive transcription factor ERF096 OS... [more]
ERF97_ARATH1.059e-1348.10Ethylene-responsive transcription factor 14 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_G05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936491 ID=CK936491; Name=CK936491; organism=Citrus sinensis; type=EST; length=818bp
GCGGGGAGCANNNTCAAAACTCTTTAATATTTNNNAGATTCAAAAACTCT
ATAAGGGACACAGCTTGCTTAGTTGCCATGGCTACACCAATTGAAAAATC
AGCGCTCGAGTTTATCGAGCAACATTTGTTCGGCGAAAATTCTCCTATTG
CGGGATTTAGTTCGAGTTTGTCGAGCGACACTTGCTCGCAATCGCAAACG
TCCAGCTCTGCATCTTCAGATCGTAGTTTCTTCAACGATGCCGTTTTCTT
CGACTATGAATCCAAACCTCAAATCATTGATCTTGTTACACCGCAACCCA
CTAATACTTGCTCTGAATTGACTAACGATTTCTTTGAATTTGACATTAGA
CCTCAAATCCAATCGCAACCGAGCAATTGTAGCTCGGAATTCGAACCCAA
GCCTAAAATATCACCAAATTCATCCTCTCAATCGTCTCGCAAACCGTCGC
TGAAAATCTCAGTGCCTAAGAAAGCCGAAGGTCATCATTTCACCAACCGG
AAAAGCAAGGCCAAACCTGAGAGTTCGGAAGAAAAGCATTACAGAGGAGT
TCGACGGAGGCCGTGGGGAAAGTACGCGGCCGAGATCCGAGATCCTACCC
GGAGAGGCGTACGTGTCTGGCTGGGGACATTTGACACGGCCACTGAAGCA
GCTAGGGCGTACGACCGTGCCGCTTTCCAGCTGCGCGGCTCGAAAGCGAT
CCTCAACTTTCCTCTTGAAGCCGGCAAGTGCGACTCAAACGCTGCGGTGG
CTAGAGAGTGTGACTCGAGCGCCGAGGCTGGCGCTTGTGAAACGAAACGG
AAGAGGGACTGTGAGAGC
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