CK936491

Overview
NameCK936491
Unique NameCK936491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2911 contig Csv1_Contig2911:1..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13
Identity = 36/60 (60.00%), Postives = 40/60 (66.67%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            +RGVRRRPWGK+AAEIRDP+R G R+WLGTF              F LRG  AILNFP E
Sbjct:   20 FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNE 79          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13
Identity = 36/60 (60.00%), Postives = 39/60 (65.00%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            YRGVR+RPWGKYAAEIRD  R G RVWLGTF              F +RG +AILNFP E
Sbjct:   14 YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE 719
            YRGVR+RPWGK+AAEIRD TR G+RVWLGTF              F  +GS A LNFP+E
Sbjct:   86 YRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVE 145          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.608e-12
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLE-AGKCDSNAAVARECDSSAEA 779
            Y+G+RRRPWG++AAEIRDP  +GVRVWLGTF               ++RG+KA LNFP E +GK  + A   ++ + + EA
Sbjct:   25 YKGIRRRPWGRWAAEIRDPI-KGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEA 104          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.449e-12
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFP 713
            YRG+R+RPWGK+AAEIRDP R+GVRVWLGTF               Q+RG KA LNFP
Sbjct:   79 YRGIRKRPWGKWAAEIRDP-RKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12
Identity = 43/102 (42.16%), Postives = 52/102 (50.98%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPL--------EAGKCDS-----NAAVARECDSSAEAGACETKRK 803
            H+RGVR+RPWG+YAAEIRDP ++  RVWLGTF               + RGSKA  NFPL        + G+ DS         ARE        AC  +RK
Sbjct:   32 HFRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTTVNDGGENDSYVNRTTVTTAREMTRQRFPFACHRERK 132          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDS 737
            YRG+R+RPWGK+AAEIRDP R G R+WLGTF               ++RGSKA +NFP E  K +S
Sbjct:  125 YRGIRQRPWGKWAAEIRDP-REGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANS 189          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 40/93 (43.01%), Postives = 49/93 (52.69%), Query Frame = 3
Query:  540 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRDCES 818
            YRG+R+RPWGK+AAEIRDP+ +GVRVWLGTF               ++RG KA LNFP        N  V  E D+       E   +   ES
Sbjct:   50 YRGIRQRPWGKWAAEIRDPS-KGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP--------NTQVEEEADTKPGGNQNELISENQVES 133          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAG 782
            HYRGVR+RPWG+YAAEIRDP ++  RVWLGTF               + RG KA  NFPL +    ++ +   E  SS E G
Sbjct:   26 HYRGVRKRPWGRYAAEIRDPGKKS-RVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSENQSTSHSSTME-SSSGETG 105          
BLAST of CK936491 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 3
Query:  537 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFXXXXXXXXXXXXXXFQLRGSKAILNFPLEA 722
            HYRGVR+RPWGK+AAEIRDP ++  RVWLGTF               + +GSKA LNFP  A
Sbjct:   91 HYRGVRQRPWGKWAAEIRDP-QKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERA 151          
The following BLAST results are available for this feature:
BLAST of CK936491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ERF98_ARATH1.806e-1360.00Ethylene-responsive transcription factor ERF098 OS... [more]
ERF95_ARATH1.806e-1360.00Ethylene-responsive transcription factor ERF095 OS... [more]
ERF93_ARATH3.081e-1358.33Ethylene-responsive transcription factor 15 OS=Ara... [more]
ERF73_ARATH2.608e-1246.91Ethylene-responsive transcription factor ERF073 OS... [more]
RAP23_ARATH4.449e-1260.34Ethylene-responsive transcription factor RAP2-3 OS... [more]
ERF80_ARATH9.911e-1242.16Ethylene-responsive transcription factor 9 OS=Arab... [more]
RA212_ARATH1.294e-1153.03Ethylene-responsive transcription factor RAP2-12 O... [more]
ERF71_ARATH1.294e-1143.01Ethylene-responsive transcription factor ERF071 OS... [more]
ERF4_NICSY2.208e-1146.34Ethylene-responsive transcription factor 4 OS=Nico... [more]
EF115_ARATH2.884e-1154.84Ethylene-responsive transcription factor ERF115 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_G05 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936491 ID=CK936491; Name=CK936491; organism=Citrus sinensis; type=EST; length=818bp
GCGGGGAGCANNNTCAAAACTCTTTAATATTTNNNAGATTCAAAAACTCT
ATAAGGGACACAGCTTGCTTAGTTGCCATGGCTACACCAATTGAAAAATC
AGCGCTCGAGTTTATCGAGCAACATTTGTTCGGCGAAAATTCTCCTATTG
CGGGATTTAGTTCGAGTTTGTCGAGCGACACTTGCTCGCAATCGCAAACG
TCCAGCTCTGCATCTTCAGATCGTAGTTTCTTCAACGATGCCGTTTTCTT
CGACTATGAATCCAAACCTCAAATCATTGATCTTGTTACACCGCAACCCA
CTAATACTTGCTCTGAATTGACTAACGATTTCTTTGAATTTGACATTAGA
CCTCAAATCCAATCGCAACCGAGCAATTGTAGCTCGGAATTCGAACCCAA
GCCTAAAATATCACCAAATTCATCCTCTCAATCGTCTCGCAAACCGTCGC
TGAAAATCTCAGTGCCTAAGAAAGCCGAAGGTCATCATTTCACCAACCGG
AAAAGCAAGGCCAAACCTGAGAGTTCGGAAGAAAAGCATTACAGAGGAGT
TCGACGGAGGCCGTGGGGAAAGTACGCGGCCGAGATCCGAGATCCTACCC
GGAGAGGCGTACGTGTCTGGCTGGGGACATTTGACACGGCCACTGAAGCA
GCTAGGGCGTACGACCGTGCCGCTTTCCAGCTGCGCGGCTCGAAAGCGAT
CCTCAACTTTCCTCTTGAAGCCGGCAAGTGCGACTCAAACGCTGCGGTGG
CTAGAGAGTGTGACTCGAGCGCCGAGGCTGGCGCTTGTGAAACGAAACGG
AAGAGGGACTGTGAGAGC
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