EY665811

Overview
NameEY665811
Unique NameEY665811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.864e-12
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 3
Query:   72 CKFDKSKIAAALSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQTYI--GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMDS 425
            C++D  K AA  S ++ +    ED +   +   GP++V I+A     ++   GV     C + ++HGVL+VGYG+          K YW++KNSWG N+G+ GY ++     N CG+ S  S
Sbjct:  213 CRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGN-------LNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPS 327          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 3
Query:   15 VGNSG--STTRPPYTGTDPFSCKFDKSKIAAALSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMDS 425
            + N+G  S  + PY       CKF +  +AA ++++  I + ++    N +   P++V I+A     Q Y  GV     C    LDHGVL VG G+          + Y+I+KNSWG +WG NGY  +   + N CG+ +M S
Sbjct:  198 IKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDN-------GEDYYIVKNSWGPSWGLNGYIHMARNKDNNCGISTMAS 333          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 40/114 (35.09%), Postives = 58/114 (50.88%), Query Frame = 3
Query:   48 YTGTDPFSCKFDKSKIA--AALSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 383
            YTG D  +CK  + K      ++   V+  +++      V + P++V I+A  M  Y  GV        + DH VLIVGYG+S        E  YW+I+NSWG  WGE GY ++
Sbjct:  218 YTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMISAANMSDYKSGVYKGACSNLWGDHNVLIVGYGTSS------DEGDYWLIRNSWGPEWGEGGYLRL 325          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 50/143 (34.97%), Postives = 66/143 (46.15%), Query Frame = 3
Query:   18 GNSGSTTRPPYTGTDPFSCKFDKSKIAAALSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT--YIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMDSSVT 434
            G   S    PY  T+  SCK++     A  + F  I   E  +   +   GP++V I+A       Y  G+     C    +DHGVL+VGYG   F         YW++KNSWGE WG  GY K+    RN CG+ S  S  T
Sbjct:  194 GGLDSEESYPYEATEE-SCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG---FESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPT 332          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 45/127 (35.43%), Postives = 60/127 (47.24%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNF-SVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 410
            PY G +   CKF+  K  A + N  ++  +DE  M   +  + P++           Y  GV     C K  D   H VL VGYG             YWI+KNSWG NWG NGY+ I  G+N+CG+
Sbjct:  204 PYIGKNG-QCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLL-------YWIVKNSWGSNWGNNGYFLIERGKNMCGL 322          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 48/135 (35.56%), Postives = 65/135 (48.15%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMDS 425
            PYT  D       +S+   ++  F  +  +++      V H P++V I+A     Q Y  GV     CG  LDHGV+ VGYG+            YW ++NSWG +WGENGY  I M RNV      CG+  M S
Sbjct:  245 PYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDHGVVAVGYGTDAATGAA-----YWTVRNSWGPDWGENGY--IRMERNVTARTGKCGIAMMAS 371          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 410
            PYTG D   CK + ++       ++     E ++   L + GP++V I+ V +  Y  GV+        L+HGVL+VGYG          +  YW +KNSWG +WGE G+++I    N CG+
Sbjct:  220 PYTGVDGV-CK-NTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHGLNHGVLLVGYGQEN-------DVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 45/127 (35.43%), Postives = 61/127 (48.03%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNFSVIS-SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 410
            PY G D   CKF   K  A + + + I+ +DE+ M   +  + P++           Y  G+     C K  D   H VL VGYG     P       YWI+KNSWG  WG NGY+ I  G+N+CG+
Sbjct:  206 PYKGQDDH-CKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIP-------YWIVKNSWGPQWGMNGYFLIERGKNMCGL 324          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 44/127 (34.65%), Postives = 60/127 (47.24%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNFSVISS-DEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 410
            PY G D + CKF   K    + + + I+  DE+ M   +  + P++           Y  G+     C K  D   H VL VGYG     P       YWI+KNSWG  WG NGY+ I  G+N+CG+
Sbjct:  206 PYQGKDGY-CKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIP-------YWIVKNSWGPQWGMNGYFLIERGKNMCGL 324          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12
Identity = 48/141 (34.04%), Postives = 70/141 (49.65%), Query Frame = 3
Query:   18 GNSGSTTRPPYTGTDPFSCKFDKSKIAAALSNFSVIS-SDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMDS 425
            G   S    PY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C +  ++H VL+VGYG+        K   YWIIKNSWGE+WG  GY  +   + N CG+ ++ S
Sbjct:  193 GGIDSEDAYPYVGQDE-SCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLAS 325          
The following BLAST results are available for this feature:
BLAST of EY665811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
CATS_CANFA1.864e-1233.61Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CYSP3_DICDI2.434e-1232.87Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CPR2_ARATH2.434e-1235.09Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATL1_HUMAN2.434e-1234.97Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATH_RAT2.434e-1235.43Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CYSP1_ORYSJ3.179e-1235.56Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATV_GVXN3.179e-1233.61Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATH_PIG3.179e-1235.43Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_HUMAN3.179e-1234.65Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATK_RAT4.152e-1234.04Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665811 ID=EY665811; Name=EY665811; organism=Citrus sinensis; type=EST; length=932bp
CACCTGCAGTACCGGTCGGGAATTCCGGGTCGACCACGCGTCCGCCTTAC
ACTGGGACCGACCCTTTTTCCTGCAAATTTGACAAAAGCAAAATTGCTGC
AGCTCTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTG
CAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGCCGTTTGG
ATGCAAACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTA
TTTGGATCATGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCCC
CGATCCGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGA
GAGAACTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGT
CTGTGGGGTCGACTCCATGGACTCATCTGTAACTGCTGGCCATACAACAT
CAAGCTAGACATTATGGAGGCTGTGCTCCCCAAGTGGAGCTTATATACGA
AAAATACAAAAGGATATCCCCCTCACAACCCGGCCCTGAAATGCAGCGCT
CACACTACATCTACCAAGGAGCGCAAGACACGATACACGCCAGAGCCACC
GGTGCCCCGGAGTAACTAAATCAAACCACCCCATACCACCACCGCTAACT
CAATCTCCCTCCCCACTCACACTGACACACCTCCCACCCCAGAACGCCCT
CCACCCACTCCATTCCCCTACCCAACTCAAATGACCCACTGCGAACCACA
AGACCTCCCTCTAACGTGCGGGCCCTGACATGAATGCACCAGACGCCCCA
ATCAATCCAAACCGACCATTAGGCACGAGCGCCCCCGCACCGGTACCAGC
ACCTTAACACCGTGCCCCGAGAAAAAACGCAAAAACATCGCCGCAGTCCC
GACAACCCCCGTCAGCCCCGCTCCCCACACGC
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