EY665811

Overview
NameEY665811
Unique NameEY665811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.423e-12
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 410
            PY   D  +C+F+ + I A  + +  I+   +       +  GP++V I+A     Q+Y  GV     C    LDH VL VGYGS G        + +W++KNSW  +WGE+GY K+   R N CG+
Sbjct:  195 PYEARDN-TCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSWATSWGESGYIKMARNRNNNCGI 313          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.083e-12
Identity = 49/149 (32.89%), Postives = 69/149 (46.31%), Query Frame = 3
Query:   15 VGNSGSTTRP--PYTGTDPFSCKFDKSKI-AAALSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----CGVDSMDSSVT 434
            + N G  T    PY   D   C  ++      ++  F  +  ++++     V H P++V I A     Q Y  GV     CG  LDHGV+ VGYG+          K YWI++NSWG  WGE+GY ++    NV    CG+  M S  T
Sbjct:  218 IKNGGIDTEDDYPYKAVDG-KCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVVAVGYGTDN-------GKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPT 357          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.083e-12
Identity = 48/141 (34.04%), Postives = 70/141 (49.65%), Query Frame = 3
Query:   18 GNSGSTTRPPYTGTDPFSCKFDKSKIAAALSNFSVIS-SDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMDS 425
            G   S    PY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C +  ++H VL+VGYG+        K   +WIIKNSWGE+WG  GY  +   + N CG+ +M S
Sbjct:  193 GGIDSEDAYPYVGQDE-SCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.083e-12
Identity = 45/129 (34.88%), Postives = 65/129 (50.39%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALS---NFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 410
            PY G +   C +     A  +    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG   D   H VL VGYG     P       YW+IKNSWG +WG+NGY+K+ MG+N+C +
Sbjct:  233 PYKGVNGV-CHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVP-------YWLIKNSWGADWGDNGYFKMEMGKNMCAI 351          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 3
Query:   21 NSGSTTRP--PYTGTDPFSCKFDKSKIAAALSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGV 410
            N G  T    PY G     C++     AA + +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L+H VL+VGYG  G          +W++KNSWGE WG  GY K+     N CG+
Sbjct:  193 NGGLATEESYPYRGQGR-ECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEES---DGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGI 324          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11
Identity = 39/126 (30.95%), Postives = 66/126 (52.38%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSK--IAAALSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 410
            P+ G +   C  D+ +  + + +  +  +  +E+++   L   GP+ + I+A  +  Y  GV  SC       L+H VL+VGYG     P       YW+ KN+WG++WGENGY+++    N CG+
Sbjct:  231 PFVGRNR-RCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGVP-------YWVFKNTWGDDWGENGYFRVRQNVNACGM 345          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11
Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMDS 425
            PY G D  +C ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L+H VL VGYG         K K +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  203 PYVGQDE-NCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11
Identity = 37/111 (33.33%), Postives = 59/111 (53.15%), Query Frame = 3
Query:  132 DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMDSSVT 434
            +E  M   LV+HGP+AV              ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGE+GY++I  G + C ++S+  + T
Sbjct:  328 NEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGSRWGEDGYFRIRRGTDECAIESIAVAAT 430          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11
Identity = 48/139 (34.53%), Postives = 67/139 (48.20%), Query Frame = 3
Query:   15 VGNSGSTTRP--PYTGTDPFSCKFDKSKIAAALSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 410
            + N G  T    PY   D  +C++D   I A +S++    S DE  +   +   GP++V I+A      +Y GGV     C   Y +H V  VGYG+            YWI+KNSWG  WGE+GY K+   R N C +
Sbjct:  183 IANRGIDTESSYPYKAIDD-NCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAI 314          
BLAST of EY665811 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 3
Query:   45 PYTGTDPFSCKFDKSKIAAALSNFSVISSDEDQMAANLV---KHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMDS 425
            PYT  +   C+++K    A ++ +  + S  +    NLV   +   +AV + + +M  Y  G+     C    ++H VL VGYG+ G          YWI+KNSWG  WGE GY ++   R N+CG+ S+ S
Sbjct:  196 PYTAVEG-QCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMM-YRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTD-------YWIVKNSWGTYWGERGYIRMARNRGNMCGIASLAS 318          
The following BLAST results are available for this feature:
BLAST of EY665811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
CYSP1_HOMAM5.423e-1234.65Digestive cysteine proteinase 1 OS=Homarus america... [more]
ORYB_ORYSJ7.083e-1232.89Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATK_MOUSE7.083e-1234.04Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
ALEU_HORVU7.083e-1234.88Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
TEST2_RAT1.578e-1133.09Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATV_NPVLD1.578e-1130.95Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATK_PIG2.061e-1135.61Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATC_CANFA2.061e-1133.33Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CRUST_PANBO2.691e-1134.53Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATLL_FASHE2.691e-1132.58Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665811 ID=EY665811; Name=EY665811; organism=Citrus sinensis; type=EST; length=932bp
CACCTGCAGTACCGGTCGGGAATTCCGGGTCGACCACGCGTCCGCCTTAC
ACTGGGACCGACCCTTTTTCCTGCAAATTTGACAAAAGCAAAATTGCTGC
AGCTCTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTG
CAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGCCGTTTGG
ATGCAAACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTA
TTTGGATCATGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCCC
CGATCCGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGA
GAGAACTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGT
CTGTGGGGTCGACTCCATGGACTCATCTGTAACTGCTGGCCATACAACAT
CAAGCTAGACATTATGGAGGCTGTGCTCCCCAAGTGGAGCTTATATACGA
AAAATACAAAAGGATATCCCCCTCACAACCCGGCCCTGAAATGCAGCGCT
CACACTACATCTACCAAGGAGCGCAAGACACGATACACGCCAGAGCCACC
GGTGCCCCGGAGTAACTAAATCAAACCACCCCATACCACCACCGCTAACT
CAATCTCCCTCCCCACTCACACTGACACACCTCCCACCCCAGAACGCCCT
CCACCCACTCCATTCCCCTACCCAACTCAAATGACCCACTGCGAACCACA
AGACCTCCCTCTAACGTGCGGGCCCTGACATGAATGCACCAGACGCCCCA
ATCAATCCAAACCGACCATTAGGCACGAGCGCCCCCGCACCGGTACCAGC
ACCTTAACACCGTGCCCCGAGAAAAAACGCAAAAACATCGCCGCAGTCCC
GACAACCCCCGTCAGCCCCGCTCCCCACACGC
back to top