CX044046

Overview
NameCX044046
Unique NameCX044046
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.768e-25
Identity = 37/62 (59.68%), Postives = 42/62 (67.74%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            +DKND WHRVER  G+F RRFRLPEN K+DQVKA+MENGVL               SIQI+G
Sbjct:   92 EDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

HSP 2 Score: 60.8474 bits (146), Expect = 1.768e-25
Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 1 
Query:   55 MSLIPSIFGNR---SVFDPFSSDVWAPL-----GSSSNEVSTFASAQVDWKETREAHVFK 210
            MS+IPS F N    ++FDPFS DVW P       S S E S   +A+VDW+ET EAHVFK
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFK 60
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.299e-25
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 3 
Query:  195 SSCFQDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            SS  ++K+D WHRVER  GKF+RRFRLPENAK+++VKASMENGVL               S+ I+G
Sbjct:   91 SSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

HSP 2 Score: 63.1586 bits (152), Expect = 2.299e-25
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1 
Query:   55 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSNEVSTFASAQVDWKETREAHVFK 210
            MSL+PS FG R  +VFDPFS DVW P           + + +V+ F +A+VDW+ET EAHVFK
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFK 63
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.990e-25
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            ++KNDKWHRVER  GKF RRFRLPENAK++++KASMENGVL               SI I+G
Sbjct:   96 EEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

HSP 2 Score: 60.077 bits (144), Expect = 2.990e-25
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1 
Query:   55 MSLIPSIFGNR--SVFDPFSSDVWAPL----------GSSSNEVSTFASAQVDWKETREAHVFK 210
            MSLIPSIFG R  +VFDPFS DV+ P            + + +V+ F +A+VDW+ET EAHVFK
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFK 64
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.896e-25
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            +DKND WHRV+R  GKF+RRFRLPENAK++QVKA MENGVL                I+I+G
Sbjct:   93 EDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154

HSP 2 Score: 62.003 bits (149), Expect = 3.896e-25
Identity = 34/61 (55.74%), Postives = 39/61 (63.93%), Query Frame = 1 
Query:   55 MSLIPSIFGN--RSVFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETREAHVFK 210
            MSLIPSIFG    +VFDPFS D+W        P  S S E S F + +VDWKET+EAHV K
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHVLK 61
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.454e-24
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 329
            ++K D WHRVER  G+F R+F+LPEN K+DQVKASMENGVL
Sbjct:   94 EEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVL 134

HSP 2 Score: 67.0106 bits (162), Expect = 1.454e-24
Identity = 36/62 (58.06%), Postives = 39/62 (62.90%), Query Frame = 1 
Query:   55 MSLIPSIFGNR----SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFK 210
            MSLIPS FGN     S+FDPFS DVW P        S S E S   +A+VDWKET EAHVFK
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFK 62
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.898e-24
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            +DKNDKWHRVER  G+F+RRFRLPENAK+DQVKA MENGVL               +I+I+G
Sbjct:   89 EDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150

HSP 2 Score: 55.0694 bits (131), Expect = 1.898e-24
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 1 
Query:   70 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETREAHVFK 210
            S+    +VFDPFS D+W P  S         S N+ + FA+A++DWKET E+HVFK
Sbjct:    2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFK 57
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.171e-24
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            ++KNDKWHRVER  GKF+RRFRLPENAK+D+VKA+M NGV+               +I I+G
Sbjct:   96 EEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

HSP 2 Score: 58.9214 bits (141), Expect = 4.171e-24
Identity = 33/64 (51.56%), Postives = 40/64 (62.50%), Query Frame = 1 
Query:   55 MSLIPSIFGNR--SVFDPFSSDVWAP-----LGSSS-----NEVSTFASAQVDWKETREAHVFK 210
            MS+IPS FG R  +VFDPFS DVW P     L +SS      E + F +  +DWKET +AHVFK
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFK 64
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.184e-24
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            +DKNDKWHRVER  G+F+RRFRLPENAK+DQVKA +ENGVL               +I+I+G
Sbjct:   89 EDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150

HSP 2 Score: 55.0694 bits (131), Expect = 4.184e-24
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 1 
Query:   70 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETREAHVFK 210
            S+    +VFDPFS D+W P  S         S N+ + FA+A++DWKET E+HVFK
Sbjct:    2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFK 57
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.072e-24
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 329
            ++K D WHRVER  G F R+FRLPEN K+DQVKASMENGVL
Sbjct:   92 EEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 132

HSP 2 Score: 64.6994 bits (156), Expect = 7.072e-24
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:   55 MSLIPSIFGNR-----SVFDPFSSDVWAP---LGSSSNEVSTFASAQVDWKETREAHVFK 210
            MSLIPS FGN      ++FDPFS DVW P   L   S+  S  A+A+VDWKET EAHVFK
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFK 60
[Close]
BLAST of CX044046 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.562e-23
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 3 
Query:  207 QDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 392
            ++KN+KWHRVE   GKF+RRFRLPENA +D+VKA MENGVL               SI I+G
Sbjct:   98 EEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159

HSP 2 Score: 57.3806 bits (137), Expect = 7.562e-23
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:   55 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSN---EVSTFASAQVDWKETREAHVFK 210
            MS+IPS FG+R  +V +PFS D+W P          G+SS    E + FA+  +DWKET +AHVFK
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFK 66
The following BLAST results are available for this feature:
BLAST of CX044046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
HS17B_ARATH1.768e-2559.6817.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP17_ARATH2.299e-2554.5517.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17C_ARATH2.990e-2558.0617.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP15_SOYBN3.896e-2556.4517.6 kDa class I heat shock protein OS=Glycine max... [more]
HS178_ARATH1.454e-2470.7317.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS16B_ORYSJ1.898e-2459.6816.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HSP11_DAUCA4.171e-2454.8417.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS16A_ORYSJ4.184e-2458.0616.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HS17A_ARATH7.072e-2473.1717.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HSP12_DAUCA7.562e-2354.8418.0 kDa class I heat shock protein OS=Daucus caro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15A07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15A07-A13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044046 ID=CX044046; Name=CX044046; organism=Citrus sinensis; type=EST; length=573bp
GATAAATAAGCAAACGCTTTCGAAGAAAGTGCTCGTCGCTTTGATTAAGC
AAAAATGTCTTTGATTCCATCTATATTCGGAAACAGGAGCGTGTTCGACC
CATTTTCCTCGGACGTCTGGGCGCCCCTTGGCTCCTCCAGCAACGAGGTG
TCAACATTCGCCAGTGCTCAAGTCGATTGGAAAGAAACCCGGGAAGCTCA
TGTTTTCAAGACAAGAACGACAAATGGCACCGTGTTGAGAGGGGCCGCGG
CAAGTTCGTGAGGAGGTTCCGGTTGCCTGAGAATGCCAAGATCGATCAAG
TTAAGGCATCAATGGAGAATGGTGTCCTCACCGTCACTGTTCCCAAAGTG
GAGGAGAAGAAGCCTGAGGTCAAATCCATTCAGATCACTGGTTGAAACTC
TCCGTTAATTGCAGCCTTTTTAATTTGGTTCTTGTTTTGTTCTGTGTGTT
AATGAACGATGTGCGATTGCTGTTAAGTGTGTCGCATACTTTTGTTCATG
TAATGTGTTGTCGACTGCTTTTTTAAGTAATAAAAATATGTTGTTTTCTT
GAAGGAGAAAAAAAAAAAAAAAA
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