EY665791

Overview
NameEY665791
Unique NameEY665791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L PVD FV+T D   +P +IT NTVL++LA+D PV K++CYVSDD  + L F SL  T++F + WV   K+
Sbjct:  264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKK 334          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L PVD FV+T D   +P +IT NTVL++LA+D PV K++CYVSDD  + L F SL  T++F + WV   K+
Sbjct:  264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKK 334          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13
Identity = 32/74 (43.24%), Postives = 53/74 (71.62%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRNK 652
            +LP +D+FV+TADAE +P ++T NT+L++L++D PV KL+ Y+SDD  S + F ++   + F K WV   +++K
Sbjct:  202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHK 275          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRNK 652
            +LP +D+FV+TAD E +P ++T NT+L++LA D PV KLACYVSDD  + L F ++   + F   WV   ++++
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHE 420          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRNK 652
            +LP +D+FV+TAD E +P ++T NT+L++LA D PV KLACYVSDD  + L F ++   + F   WV   ++++
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHE 420          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L PVD+FV+T D   +P ++T NTVL++LA+D PV K++CYVSDD  S L F SL  T++F + WV   K+
Sbjct:  314 LAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKK 384          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L PVD+FV+T D   +P +IT NTVL++LA+D PV K+ACYVSDD  + L F +L  T++F + WV   K+
Sbjct:  352 LSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKK 422          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L PVD+FV+T D   +P +IT NTVL++LA+D PV K+ACYVSDD  + L F +L  T++F + WV   K+
Sbjct:  353 LAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKK 423          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  329 LALIISASFAIVFVILQXXXXXXXXXXXXLNRI----------QELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L++I    FA+ +++ Q            L+R+           +L  VD+FV+T D   +P ++T NTVL++LA+D PV K++CYVSDD  + L F +L  TS+F + WV   K+
Sbjct:  307 LSVICEIWFALSWILDQFPKWFPINRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKK 422          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.222e-12
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            +LP +D+F++TAD   +PT++T NT+L++LA + PV KL  Y+SDD  + L F S+     F K WV   +++
Sbjct:  235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKH 307          

HSP 2 Score: 25.409 bits (54), Expect = 3.222e-12
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 3
Query:  198 WFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            W ++ +CE  F F W+L    K  P+        L+E+
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221          
The following BLAST results are available for this feature:
BLAST of EY665791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CESA4_ORYSJ5.800e-1350.70Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI5.800e-1350.70Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CSLD6_ARATH7.575e-1343.24Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD1_ORYSJ9.893e-1344.59Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI9.893e-1344.59Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CESA7_ARATH9.893e-1350.70Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA6_ARATH9.893e-1350.70Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA2_ARATH9.893e-1350.70Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA8_ORYSJ2.204e-1235.34Probable cellulose synthase A catalytic subunit 8 ... [more]
CSLD5_ORYSJ3.222e-1241.10Cellulose synthase-like protein D5 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665791 ID=EY665791; Name=EY665791; organism=Citrus sinensis; type=EST; length=873bp
TGCCGAAACCCAAAAATCCTTTTTACGAGTACTTGTTTTTCAAGCTCATG
GCCAATACACCCTTGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAA
AAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTAT
GTCTGCTCTTCTATCGGCTCTCAACGGTGAAGAATCATGGATTTGCTTGG
TTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCAT
CGACAACTGCAAGTGGACTCCTTTGACCTACAAAACATATCCCCAACGTC
TCCAAGAAAGGTAACAAATCAAATAACGTTAGCATTAATAATTTCCGCAT
CATTTGCAATTGTCTTTGTCATTTTGCAAGTTACTACACACACACACACA
CGCACATGTGTACGACTCAACAGGATACAGGAGCTGCCCCCAGTGGACAT
GTTTGTGACAACTGCTGATGCTGAACTCAAGCCGACAATCATCACTGTAA
ACACAGTGCTGGCTTTGTTGGCAATTGATAATCCAGTTCACAAGCTCGCT
TGCTATGTTTCTGATGATGCCTGCTCCCCTCTCAATTTCTAATCTCTTGT
TTAAACTTCTAAATTTCCTAAATTTTGGGTTCATTCTGCAAAAAGGAATA
AAGGAAAAATAAAAGCTCCCCTTTAAAAACTTCCAAAATATTGACCCGCC
GAATTCAAGTTCAGGGGAATCTCCTTGCAAATTGGGAAAAACTTTAAAAA
AAGATTTGAATAACTTTACCCAAAAACTTAAAAATGGCCCCCCAAAAAAT
TTTTCTTTTATTTTTCTTAAAGGGAGAAAATGGGGGTTTTTCTCCCAATA
AAAAACCCACTGAAACTCCCCCC
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