EY665791

Overview
NameEY665791
Unique NameEY665791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.222e-12
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            +LP +D+F++TAD   +PT++T NT+L++LA + PV KL  Y+SDD  + L F S+     F K WV   +++
Sbjct:  235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKH 307          

HSP 2 Score: 25.409 bits (54), Expect = 3.222e-12
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 3
Query:  198 WFLAFLCESCFTFIWILIDNCKWTPLTYKTYPQRLQER 311
            W ++ +CE  F F W+L    K  P+        L+E+
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  419 NRIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            N   +LP +D+FV+TAD E +P ++T NT+L++LA D PV KL+CYVSDD  + L F ++   + F   WV   +++
Sbjct:  392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKH 468          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  419 NRIQELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            N   +LP +D+FV+TAD E +P ++T NT+L++LA D PV KL+CYVSDD  + L F ++   + F   WV   +++
Sbjct:  392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKH 468          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L  VD+FV+T D   +P ++T NTVL++LA+D PV K++CYVSDD  S L F SL  T++F + WV   K+
Sbjct:  343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKK 413          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L  VD+FV+T D   +P ++T NTVL++LA+D PV K++CYVSDD  S L F SL  T++F + WV   K+
Sbjct:  343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKK 413          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  329 LALIISASFAIVFVILQXXXXXXXXXXXXLNRIQ----------ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            +++I    FA+ +V+ Q            L+R+           EL  VD+FV+T D   +P +IT NTVL++LA+D PV ++ACYVSDD  + L F +L  T++F + WV   K+
Sbjct:  295 ISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLRYEKEGKPSELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKK 410          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 2
Query:  434 LPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKR 646
            L P+D FV+T D   +P IIT NTVL++LA+D PV +++CYVSDD  S L F +L  T++F + WV   K+
Sbjct:  289 LAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKK 359          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.094e-11
Identity = 30/73 (41.10%), Postives = 52/73 (71.23%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            +LP VD+FV+TAD E +P ++T NT+L++LA+D P+ KL+ Y+SDD  + L F ++    +F ++WV   +++
Sbjct:  263 DLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKH 335          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            +LP VD+FVTT D   +P + TVNT+L++LA D PV + ACY+SDD  + +++ ++V  +KF + WV   +++
Sbjct:  168 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKH 240          
BLAST of EY665791 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  431 ELPPVDMFVTTADAELKPTIITVNTVLALLAIDNPVHKLACYVSDDACSPLNF*SLV*TSKFPKFWVHSAKRN 649
            +LP VD+FVTT D   +P + TVNT+L++LA D PV + ACY+SDD  + +++ ++V  +KF + WV   +++
Sbjct:  138 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKH 210          
The following BLAST results are available for this feature:
BLAST of EY665791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CSLD5_ORYSI3.222e-1241.10Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD2_ORYSJ3.759e-1242.86Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI3.759e-1242.86Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CESA9_ORYSJ3.759e-1249.30Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI3.759e-1249.30Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA5_ARATH3.759e-1236.21Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA7_ORYSJ4.910e-1249.30Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CSLD1_ARATH1.094e-1141.10Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLF2_ORYSJ7.090e-1142.47Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF1_ORYSJ7.090e-1142.47Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665791 ID=EY665791; Name=EY665791; organism=Citrus sinensis; type=EST; length=873bp
TGCCGAAACCCAAAAATCCTTTTTACGAGTACTTGTTTTTCAAGCTCATG
GCCAATACACCCTTGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAA
AAACACATATCATAGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTAT
GTCTGCTCTTCTATCGGCTCTCAACGGTGAAGAATCATGGATTTGCTTGG
TTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCAT
CGACAACTGCAAGTGGACTCCTTTGACCTACAAAACATATCCCCAACGTC
TCCAAGAAAGGTAACAAATCAAATAACGTTAGCATTAATAATTTCCGCAT
CATTTGCAATTGTCTTTGTCATTTTGCAAGTTACTACACACACACACACA
CGCACATGTGTACGACTCAACAGGATACAGGAGCTGCCCCCAGTGGACAT
GTTTGTGACAACTGCTGATGCTGAACTCAAGCCGACAATCATCACTGTAA
ACACAGTGCTGGCTTTGTTGGCAATTGATAATCCAGTTCACAAGCTCGCT
TGCTATGTTTCTGATGATGCCTGCTCCCCTCTCAATTTCTAATCTCTTGT
TTAAACTTCTAAATTTCCTAAATTTTGGGTTCATTCTGCAAAAAGGAATA
AAGGAAAAATAAAAGCTCCCCTTTAAAAACTTCCAAAATATTGACCCGCC
GAATTCAAGTTCAGGGGAATCTCCTTGCAAATTGGGAAAAACTTTAAAAA
AAGATTTGAATAACTTTACCCAAAAACTTAAAAATGGCCCCCCAAAAAAT
TTTTCTTTTATTTTTCTTAAAGGGAGAAAATGGGGGTTTTTCTCCCAATA
AAAAACCCACTGAAACTCCCCCC
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